Protein–RNA interactions for Protein: Q4LDE5

SVEP1, Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1, humanhuman

Predictions only

Length 3,571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVEP1Q4LDE5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SVEP1Q4LDE5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SVEP1Q4LDE5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.19
SVEP1Q4LDE5 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SVEP1Q4LDE5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.19
SVEP1Q4LDE5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.19
SVEP1Q4LDE5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.27■□□□□ 0.19
SVEP1Q4LDE5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
SVEP1Q4LDE5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SVEP1Q4LDE5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 AC116562.2-201ENST00000507042 360 ntBASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 MYC-208ENST00000641036 567 ntBASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 AC027702.1-201ENST00000563810 1770 ntBASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 LINC01465-201ENST00000408887 1940 ntBASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 AL121829.2-201ENST00000620908 328 ntBASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.26■□□□□ 0.19
SVEP1Q4LDE5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 AC023632.3-201ENST00000521633 145 ntBASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 NIFKP9-201ENST00000419265 221 ntBASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 DUX4L26-201ENST00000489078 1255 ntBASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 FITM1-202ENST00000559294 800 ntBASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 PGM5P4-201ENST00000421970 445 ntBASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.25■□□□□ 0.19
SVEP1Q4LDE5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
SVEP1Q4LDE5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SVEP1Q4LDE5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.24■□□□□ 0.19
SVEP1Q4LDE5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.24■□□□□ 0.19
SVEP1Q4LDE5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.24■□□□□ 0.19
SVEP1Q4LDE5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.24■□□□□ 0.19
SVEP1Q4LDE5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SVEP1Q4LDE5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SVEP1Q4LDE5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.24■□□□□ 0.19
SVEP1Q4LDE5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.24■□□□□ 0.19
SVEP1Q4LDE5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.24■□□□□ 0.19
SVEP1Q4LDE5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SVEP1Q4LDE5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SVEP1Q4LDE5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.24■□□□□ 0.19
SVEP1Q4LDE5 KRT16P1-201ENST00000399124 1418 ntBASIC16.24■□□□□ 0.19
SVEP1Q4LDE5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 AL691432.2-201ENST00000607222 2038 ntBASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 MIR1238-201ENST00000408483 83 ntBASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.23■□□□□ 0.19
SVEP1Q4LDE5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms