Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRA2BP62995 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRA2BP62995 PNMA6B-201ENST00000538162 1200 ntBASIC18.71■□□□□ 0.59
TRA2BP62995 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.71■□□□□ 0.59
TRA2BP62995 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.71■□□□□ 0.59
TRA2BP62995 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRA2BP62995 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.71■□□□□ 0.59
TRA2BP62995 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRA2BP62995 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
TRA2BP62995 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.71■□□□□ 0.59
TRA2BP62995 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.71■□□□□ 0.59
TRA2BP62995 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRA2BP62995 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.71■□□□□ 0.59
TRA2BP62995 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TRA2BP62995 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TRA2BP62995 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
TRA2BP62995 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRA2BP62995 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRA2BP62995 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRA2BP62995 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRA2BP62995 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRA2BP62995 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRA2BP62995 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRA2BP62995 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRA2BP62995 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.7■□□□□ 0.58
TRA2BP62995 TFP1-202ENST00000475455 1573 ntBASIC18.7■□□□□ 0.58
TRA2BP62995 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.7■□□□□ 0.58
TRA2BP62995 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.7■□□□□ 0.58
TRA2BP62995 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.7■□□□□ 0.58
TRA2BP62995 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.7■□□□□ 0.58
TRA2BP62995 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.7■□□□□ 0.58
TRA2BP62995 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TRA2BP62995 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.7■□□□□ 0.58
TRA2BP62995 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.7■□□□□ 0.58
TRA2BP62995 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.7■□□□□ 0.58
TRA2BP62995 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.7■□□□□ 0.58
TRA2BP62995 AC006557.6-201ENST00000623071 864 ntBASIC18.7■□□□□ 0.58
TRA2BP62995 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRA2BP62995 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.7■□□□□ 0.58
TRA2BP62995 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.69■□□□□ 0.58
TRA2BP62995 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRA2BP62995 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.69■□□□□ 0.58
TRA2BP62995 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRA2BP62995 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.69■□□□□ 0.58
TRA2BP62995 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.69■□□□□ 0.58
TRA2BP62995 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRA2BP62995 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.69■□□□□ 0.58
TRA2BP62995 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.69■□□□□ 0.58
TRA2BP62995 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRA2BP62995 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRA2BP62995 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.69■□□□□ 0.58
TRA2BP62995 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.69■□□□□ 0.58
TRA2BP62995 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.69■□□□□ 0.58
TRA2BP62995 AC098934.4-201ENST00000564127 592 ntBASIC18.69■□□□□ 0.58
TRA2BP62995 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
TRA2BP62995 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRA2BP62995 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.69■□□□□ 0.58
TRA2BP62995 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.69■□□□□ 0.58
TRA2BP62995 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRA2BP62995 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRA2BP62995 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRA2BP62995 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TRA2BP62995 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRA2BP62995 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRA2BP62995 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRA2BP62995 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRA2BP62995 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRA2BP62995 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.68■□□□□ 0.58
TRA2BP62995 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRA2BP62995 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.68■□□□□ 0.58
TRA2BP62995 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRA2BP62995 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRA2BP62995 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.68■□□□□ 0.58
TRA2BP62995 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.68■□□□□ 0.58
TRA2BP62995 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.68■□□□□ 0.58
TRA2BP62995 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.68■□□□□ 0.58
TRA2BP62995 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.68■□□□□ 0.58
TRA2BP62995 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRA2BP62995 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRA2BP62995 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.68■□□□□ 0.58
TRA2BP62995 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.68■□□□□ 0.58
TRA2BP62995 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRA2BP62995 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRA2BP62995 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.68■□□□□ 0.58
TRA2BP62995 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRA2BP62995 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRA2BP62995 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.67■□□□□ 0.58
TRA2BP62995 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRA2BP62995 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRA2BP62995 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRA2BP62995 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRA2BP62995 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.67■□□□□ 0.58
TRA2BP62995 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRA2BP62995 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.67■□□□□ 0.58
TRA2BP62995 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRA2BP62995 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRA2BP62995 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.67■□□□□ 0.58
TRA2BP62995 RPS2P52-201ENST00000469610 820 ntBASIC18.67■□□□□ 0.58
TRA2BP62995 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.67■□□□□ 0.58
TRA2BP62995 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms