Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.95■□□□□ 0.62
VSX2P58304 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
VSX2P58304 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VSX2P58304 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.95■□□□□ 0.62
VSX2P58304 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
VSX2P58304 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
VSX2P58304 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
VSX2P58304 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.95■□□□□ 0.62
VSX2P58304 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
VSX2P58304 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VSX2P58304 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.94■□□□□ 0.62
VSX2P58304 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
VSX2P58304 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VSX2P58304 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VSX2P58304 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
VSX2P58304 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VSX2P58304 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VSX2P58304 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VSX2P58304 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.94■□□□□ 0.62
VSX2P58304 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VSX2P58304 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VSX2P58304 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
VSX2P58304 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.94■□□□□ 0.62
VSX2P58304 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.94■□□□□ 0.62
VSX2P58304 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.94■□□□□ 0.62
VSX2P58304 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.94■□□□□ 0.62
VSX2P58304 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VSX2P58304 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VSX2P58304 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
VSX2P58304 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VSX2P58304 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VSX2P58304 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.93■□□□□ 0.62
VSX2P58304 AL162377.1-201ENST00000618844 1793 ntBASIC18.93■□□□□ 0.62
VSX2P58304 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
VSX2P58304 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VSX2P58304 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.93■□□□□ 0.62
VSX2P58304 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.93■□□□□ 0.62
VSX2P58304 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VSX2P58304 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VSX2P58304 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VSX2P58304 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VSX2P58304 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.93■□□□□ 0.62
VSX2P58304 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.93■□□□□ 0.62
VSX2P58304 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.93■□□□□ 0.62
VSX2P58304 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
VSX2P58304 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.93■□□□□ 0.62
VSX2P58304 AC124016.1-201ENST00000609552 612 ntBASIC18.93■□□□□ 0.62
VSX2P58304 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.93■□□□□ 0.62
VSX2P58304 AC066615.1-201ENST00000640911 628 ntBASIC18.93■□□□□ 0.62
VSX2P58304 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
VSX2P58304 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VSX2P58304 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VSX2P58304 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.93■□□□□ 0.62
VSX2P58304 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
VSX2P58304 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.93■□□□□ 0.62
VSX2P58304 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.92■□□□□ 0.62
VSX2P58304 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.92■□□□□ 0.62
VSX2P58304 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.92■□□□□ 0.62
VSX2P58304 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.92■□□□□ 0.62
VSX2P58304 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.92■□□□□ 0.62
VSX2P58304 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VSX2P58304 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
VSX2P58304 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VSX2P58304 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.92■□□□□ 0.62
VSX2P58304 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VSX2P58304 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.92■□□□□ 0.62
VSX2P58304 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.92■□□□□ 0.62
VSX2P58304 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.92■□□□□ 0.62
VSX2P58304 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.92■□□□□ 0.62
VSX2P58304 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.92■□□□□ 0.62
VSX2P58304 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.92■□□□□ 0.62
VSX2P58304 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
VSX2P58304 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VSX2P58304 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VSX2P58304 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VSX2P58304 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.92■□□□□ 0.62
VSX2P58304 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VSX2P58304 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VSX2P58304 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VSX2P58304 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.91■□□□□ 0.62
VSX2P58304 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VSX2P58304 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VSX2P58304 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VSX2P58304 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VSX2P58304 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VSX2P58304 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
VSX2P58304 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.91■□□□□ 0.62
VSX2P58304 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.91■□□□□ 0.62
VSX2P58304 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.91■□□□□ 0.62
VSX2P58304 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
VSX2P58304 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.91■□□□□ 0.62
VSX2P58304 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VSX2P58304 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.91■□□□□ 0.62
VSX2P58304 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VSX2P58304 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.91■□□□□ 0.62
VSX2P58304 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VSX2P58304 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VSX2P58304 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VSX2P58304 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.91■□□□□ 0.62
VSX2P58304 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms