Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 AC136944.6-201ENST00000634818 245 ntBASIC25.37■■□□□ 1.65
KCNQ4P56696 AC116562.4-202ENST00000641738 218 ntBASIC25.37■■□□□ 1.65
KCNQ4P56696 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KCNQ4P56696 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KCNQ4P56696 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
KCNQ4P56696 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
KCNQ4P56696 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
KCNQ4P56696 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
KCNQ4P56696 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
KCNQ4P56696 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC25.36■■□□□ 1.65
KCNQ4P56696 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC25.36■■□□□ 1.65
KCNQ4P56696 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
KCNQ4P56696 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
KCNQ4P56696 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
KCNQ4P56696 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC25.36■■□□□ 1.65
KCNQ4P56696 AL359075.1-203ENST00000462729 1002 ntBASIC25.36■■□□□ 1.65
KCNQ4P56696 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC25.36■■□□□ 1.65
KCNQ4P56696 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
KCNQ4P56696 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
KCNQ4P56696 CLEC4GP1-201ENST00000596555 870 ntBASIC25.36■■□□□ 1.65
KCNQ4P56696 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC25.36■■□□□ 1.65
KCNQ4P56696 AC012313.10-201ENST00000623509 926 ntBASIC25.36■■□□□ 1.65
KCNQ4P56696 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
KCNQ4P56696 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC25.36■■□□□ 1.65
KCNQ4P56696 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC25.36■■□□□ 1.65
KCNQ4P56696 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
KCNQ4P56696 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC25.36■■□□□ 1.65
KCNQ4P56696 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC25.36■■□□□ 1.65
KCNQ4P56696 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
KCNQ4P56696 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
KCNQ4P56696 Z98882.1-201ENST00000622160 2253 ntBASIC25.35■■□□□ 1.65
KCNQ4P56696 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
KCNQ4P56696 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC25.35■■□□□ 1.65
KCNQ4P56696 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC25.35■■□□□ 1.65
KCNQ4P56696 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
KCNQ4P56696 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC25.35■■□□□ 1.65
KCNQ4P56696 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
KCNQ4P56696 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
KCNQ4P56696 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
KCNQ4P56696 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
KCNQ4P56696 KRT18P16-201ENST00000510337 1294 ntBASIC25.35■■□□□ 1.65
KCNQ4P56696 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
KCNQ4P56696 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC25.35■■□□□ 1.65
KCNQ4P56696 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
KCNQ4P56696 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC25.35■■□□□ 1.65
KCNQ4P56696 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC25.35■■□□□ 1.65
KCNQ4P56696 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC25.35■■□□□ 1.65
KCNQ4P56696 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
KCNQ4P56696 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
KCNQ4P56696 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
KCNQ4P56696 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
KCNQ4P56696 TFP1-202ENST00000475455 1573 ntBASIC25.35■■□□□ 1.65
KCNQ4P56696 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
KCNQ4P56696 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
KCNQ4P56696 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
KCNQ4P56696 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC25.34■■□□□ 1.65
KCNQ4P56696 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
KCNQ4P56696 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
KCNQ4P56696 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC25.34■■□□□ 1.65
KCNQ4P56696 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
KCNQ4P56696 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
KCNQ4P56696 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
KCNQ4P56696 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC25.34■■□□□ 1.65
KCNQ4P56696 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC25.34■■□□□ 1.65
KCNQ4P56696 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC25.34■■□□□ 1.65
KCNQ4P56696 AL121956.5-201ENST00000625261 221 ntBASIC25.34■■□□□ 1.65
KCNQ4P56696 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC25.34■■□□□ 1.65
KCNQ4P56696 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC25.34■■□□□ 1.65
KCNQ4P56696 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
KCNQ4P56696 MYB-221ENST00000527615 2381 ntTSL 5 BASIC25.34■■□□□ 1.65
KCNQ4P56696 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC25.34■■□□□ 1.65
KCNQ4P56696 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
KCNQ4P56696 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
KCNQ4P56696 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
KCNQ4P56696 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.33■■□□□ 1.65
KCNQ4P56696 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
KCNQ4P56696 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
KCNQ4P56696 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
KCNQ4P56696 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.33■■□□□ 1.65
KCNQ4P56696 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC25.33■■□□□ 1.65
KCNQ4P56696 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
KCNQ4P56696 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC25.33■■□□□ 1.65
KCNQ4P56696 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC25.33■■□□□ 1.65
KCNQ4P56696 HCG4P8-203ENST00000443049 980 ntBASIC25.33■■□□□ 1.65
KCNQ4P56696 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
KCNQ4P56696 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
KCNQ4P56696 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
KCNQ4P56696 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC25.33■■□□□ 1.65
KCNQ4P56696 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC25.33■■□□□ 1.65
KCNQ4P56696 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
KCNQ4P56696 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
KCNQ4P56696 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
KCNQ4P56696 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
KCNQ4P56696 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
KCNQ4P56696 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
KCNQ4P56696 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
KCNQ4P56696 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
KCNQ4P56696 AC116351.2-201ENST00000606540 1585 ntBASIC25.32■■□□□ 1.64
KCNQ4P56696 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
KCNQ4P56696 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms