Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CDH15P55291 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CDH15P55291 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CDH15P55291 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH15P55291 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH15P55291 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH15P55291 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH15P55291 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH15P55291 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH15P55291 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH15P55291 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH15P55291 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.4■□□□□ 0.54
CDH15P55291 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH15P55291 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.4■□□□□ 0.54
CDH15P55291 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.4■□□□□ 0.54
CDH15P55291 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CDH15P55291 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CDH15P55291 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CDH15P55291 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH15P55291 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH15P55291 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CDH15P55291 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH15P55291 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH15P55291 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
CDH15P55291 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH15P55291 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH15P55291 AL032819.2-201ENST00000624543 2162 ntBASIC18.4■□□□□ 0.54
CDH15P55291 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.39■□□□□ 0.54
CDH15P55291 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDH15P55291 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDH15P55291 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.39■□□□□ 0.53
CDH15P55291 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.39■□□□□ 0.53
CDH15P55291 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.39■□□□□ 0.53
CDH15P55291 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CDH15P55291 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.39■□□□□ 0.53
CDH15P55291 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.39■□□□□ 0.53
CDH15P55291 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.39■□□□□ 0.53
CDH15P55291 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH15P55291 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.39■□□□□ 0.53
CDH15P55291 AC022517.1-201ENST00000592429 346 ntBASIC18.39■□□□□ 0.53
CDH15P55291 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.39■□□□□ 0.53
CDH15P55291 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH15P55291 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH15P55291 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH15P55291 AC055733.4-201ENST00000638462 1354 ntBASIC18.39■□□□□ 0.53
CDH15P55291 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CDH15P55291 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH15P55291 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH15P55291 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH15P55291 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH15P55291 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH15P55291 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.38■□□□□ 0.53
CDH15P55291 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH15P55291 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH15P55291 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH15P55291 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.38■□□□□ 0.53
CDH15P55291 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.38■□□□□ 0.53
CDH15P55291 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
CDH15P55291 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.38■□□□□ 0.53
CDH15P55291 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH15P55291 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.38■□□□□ 0.53
CDH15P55291 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH15P55291 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH15P55291 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH15P55291 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH15P55291 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH15P55291 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH15P55291 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CDH15P55291 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH15P55291 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CDH15P55291 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH15P55291 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
CDH15P55291 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH15P55291 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH15P55291 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH15P55291 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH15P55291 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH15P55291 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH15P55291 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CDH15P55291 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH15P55291 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH15P55291 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH15P55291 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH15P55291 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH15P55291 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH15P55291 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH15P55291 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH15P55291 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.37■□□□□ 0.53
CDH15P55291 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH15P55291 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDH15P55291 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDH15P55291 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH15P55291 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH15P55291 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH15P55291 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH15P55291 AL390961.4-201ENST00000623958 2535 ntBASIC18.37■□□□□ 0.53
CDH15P55291 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH15P55291 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.37■□□□□ 0.53
CDH15P55291 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.37■□□□□ 0.53
CDH15P55291 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms