Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.34■□□□□ 0.69
CDH13P55290 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH13P55290 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH13P55290 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH13P55290 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH13P55290 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH13P55290 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH13P55290 AC093787.1-201ENST00000450396 207 ntBASIC19.34■□□□□ 0.69
CDH13P55290 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.34■□□□□ 0.69
CDH13P55290 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH13P55290 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH13P55290 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CDH13P55290 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CDH13P55290 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH13P55290 KRT17P1-201ENST00000399211 1546 ntBASIC19.34■□□□□ 0.69
CDH13P55290 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CDH13P55290 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.34■□□□□ 0.69
CDH13P55290 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CDH13P55290 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH13P55290 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH13P55290 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH13P55290 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH13P55290 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDH13P55290 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH13P55290 AC018445.3-201ENST00000624177 1945 ntBASIC19.33■□□□□ 0.69
CDH13P55290 AIRN-201ENST00000601203 4374 ntBASIC19.33■□□□□ 0.69
CDH13P55290 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.33■□□□□ 0.69
CDH13P55290 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CDH13P55290 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH13P55290 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDH13P55290 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.33■□□□□ 0.69
CDH13P55290 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CDH13P55290 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CDH13P55290 AC004911.1-201ENST00000416316 871 ntBASIC19.33■□□□□ 0.68
CDH13P55290 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH13P55290 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.33■□□□□ 0.68
CDH13P55290 AC022517.1-201ENST00000592429 346 ntBASIC19.33■□□□□ 0.68
CDH13P55290 MIR5787-201ENST00000611784 55 ntBASIC19.33■□□□□ 0.68
CDH13P55290 OR10C1-204ENST00000622521 1039 ntBASIC19.33■□□□□ 0.68
CDH13P55290 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.33■□□□□ 0.68
CDH13P55290 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.33■□□□□ 0.68
CDH13P55290 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.33■□□□□ 0.68
CDH13P55290 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH13P55290 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.33■□□□□ 0.68
CDH13P55290 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH13P55290 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDH13P55290 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH13P55290 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH13P55290 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDH13P55290 AC120498.9-201ENST00000339021 3867 ntBASIC19.32■□□□□ 0.68
CDH13P55290 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH13P55290 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH13P55290 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.32■□□□□ 0.68
CDH13P55290 AP000974.1-201ENST00000623909 2387 ntBASIC19.32■□□□□ 0.68
CDH13P55290 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH13P55290 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH13P55290 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.32■□□□□ 0.68
CDH13P55290 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.32■□□□□ 0.68
CDH13P55290 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.32■□□□□ 0.68
CDH13P55290 AL589743.5-201ENST00000616611 1050 ntBASIC19.32■□□□□ 0.68
CDH13P55290 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH13P55290 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH13P55290 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.32■□□□□ 0.68
CDH13P55290 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDH13P55290 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDH13P55290 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
CDH13P55290 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDH13P55290 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.32■□□□□ 0.68
CDH13P55290 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.32■□□□□ 0.68
CDH13P55290 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.31■□□□□ 0.68
CDH13P55290 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDH13P55290 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.31■□□□□ 0.68
CDH13P55290 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH13P55290 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH13P55290 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CDH13P55290 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH13P55290 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH13P55290 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CDH13P55290 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH13P55290 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.31■□□□□ 0.68
CDH13P55290 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH13P55290 HLA-G-202ENST00000376815 851 ntBASIC19.31■□□□□ 0.68
CDH13P55290 HLA-G-203ENST00000376818 1127 ntBASIC19.31■□□□□ 0.68
CDH13P55290 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH13P55290 C2orf69P4-201ENST00000565394 541 ntBASIC19.31■□□□□ 0.68
CDH13P55290 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CDH13P55290 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CDH13P55290 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH13P55290 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH13P55290 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH13P55290 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDH13P55290 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.31■□□□□ 0.68
CDH13P55290 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CDH13P55290 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH13P55290 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH13P55290 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH13P55290 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH13P55290 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDH13P55290 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.31■□□□□ 0.68
CDH13P55290 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms