Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASP6P55212 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CASP6P55212 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CASP6P55212 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.79■□□□□ 0.44
CASP6P55212 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CASP6P55212 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CASP6P55212 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASP6P55212 AC121338.2-201ENST00000622535 1744 ntBASIC17.78■□□□□ 0.44
CASP6P55212 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASP6P55212 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CASP6P55212 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.78■□□□□ 0.44
CASP6P55212 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
CASP6P55212 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASP6P55212 NIFKP9-201ENST00000419265 221 ntBASIC17.78■□□□□ 0.44
CASP6P55212 AL137013.1-201ENST00000432946 1228 ntBASIC17.78■□□□□ 0.44
CASP6P55212 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASP6P55212 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.78■□□□□ 0.44
CASP6P55212 KRT18P35-201ENST00000510488 1269 ntBASIC17.78■□□□□ 0.44
CASP6P55212 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.78■□□□□ 0.44
CASP6P55212 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.78■□□□□ 0.44
CASP6P55212 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CASP6P55212 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASP6P55212 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASP6P55212 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CASP6P55212 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASP6P55212 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CASP6P55212 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASP6P55212 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASP6P55212 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASP6P55212 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CASP6P55212 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CASP6P55212 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CASP6P55212 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.77■□□□□ 0.44
CASP6P55212 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
CASP6P55212 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CASP6P55212 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CASP6P55212 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASP6P55212 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASP6P55212 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASP6P55212 AC113347.1-201ENST00000413321 391 ntBASIC17.77■□□□□ 0.44
CASP6P55212 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.77■□□□□ 0.44
CASP6P55212 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
CASP6P55212 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CASP6P55212 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CASP6P55212 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.77■□□□□ 0.44
CASP6P55212 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.77■□□□□ 0.44
CASP6P55212 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CASP6P55212 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.77■□□□□ 0.44
CASP6P55212 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CASP6P55212 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CASP6P55212 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CASP6P55212 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CASP6P55212 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
CASP6P55212 AC079598.2-202ENST00000546624 1451 ntBASIC17.76■□□□□ 0.43
CASP6P55212 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASP6P55212 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CASP6P55212 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
CASP6P55212 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASP6P55212 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.76■□□□□ 0.43
CASP6P55212 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CASP6P55212 AC005521.1-201ENST00000393351 872 ntBASIC17.76■□□□□ 0.43
CASP6P55212 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.76■□□□□ 0.43
CASP6P55212 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.76■□□□□ 0.43
CASP6P55212 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.76■□□□□ 0.43
CASP6P55212 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASP6P55212 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.76■□□□□ 0.43
CASP6P55212 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.76■□□□□ 0.43
CASP6P55212 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CASP6P55212 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CASP6P55212 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASP6P55212 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CASP6P55212 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASP6P55212 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASP6P55212 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.75■□□□□ 0.43
CASP6P55212 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASP6P55212 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CASP6P55212 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASP6P55212 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASP6P55212 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CASP6P55212 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.75■□□□□ 0.43
CASP6P55212 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CASP6P55212 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASP6P55212 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASP6P55212 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASP6P55212 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CASP6P55212 LIN28AP1-201ENST00000429574 405 ntBASIC17.75■□□□□ 0.43
CASP6P55212 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.75■□□□□ 0.43
CASP6P55212 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.75■□□□□ 0.43
CASP6P55212 FITM1-202ENST00000559294 800 ntBASIC17.75■□□□□ 0.43
CASP6P55212 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.75■□□□□ 0.43
CASP6P55212 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.75■□□□□ 0.43
CASP6P55212 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.75■□□□□ 0.43
CASP6P55212 AL031985.4-201ENST00000642138 673 ntBASIC17.75■□□□□ 0.43
CASP6P55212 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASP6P55212 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CASP6P55212 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.75■□□□□ 0.43
CASP6P55212 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CASP6P55212 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASP6P55212 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.75■□□□□ 0.43
CASP6P55212 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms