Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK2P53671 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
LIMK2P53671 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK2P53671 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.95■□□□□ 0.78
LIMK2P53671 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK2P53671 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
LIMK2P53671 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK2P53671 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK2P53671 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
LIMK2P53671 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK2P53671 PRORSD1P-201ENST00000295112 541 ntBASIC19.95■□□□□ 0.78
LIMK2P53671 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.95■□□□□ 0.78
LIMK2P53671 ESRRAP1-201ENST00000400596 1257 ntBASIC19.95■□□□□ 0.78
LIMK2P53671 AL355472.2-201ENST00000422958 438 ntBASIC19.95■□□□□ 0.78
LIMK2P53671 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.95■□□□□ 0.78
LIMK2P53671 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.95■□□□□ 0.78
LIMK2P53671 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.95■□□□□ 0.78
LIMK2P53671 CYP2T3P-201ENST00000601990 817 ntBASIC19.95■□□□□ 0.78
LIMK2P53671 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.95■□□□□ 0.78
LIMK2P53671 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
LIMK2P53671 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK2P53671 KRT17P1-201ENST00000399211 1546 ntBASIC19.95■□□□□ 0.78
LIMK2P53671 TREX1-205ENST00000625293 1783 ntBASIC19.95■□□□□ 0.78
LIMK2P53671 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK2P53671 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.95■□□□□ 0.78
LIMK2P53671 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
LIMK2P53671 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIMK2P53671 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.95■□□□□ 0.78
LIMK2P53671 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.94■□□□□ 0.78
LIMK2P53671 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.94■□□□□ 0.78
LIMK2P53671 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.94■□□□□ 0.78
LIMK2P53671 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
LIMK2P53671 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LIMK2P53671 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.94■□□□□ 0.78
LIMK2P53671 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.94■□□□□ 0.78
LIMK2P53671 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.94■□□□□ 0.78
LIMK2P53671 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LIMK2P53671 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
LIMK2P53671 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LIMK2P53671 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LIMK2P53671 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.94■□□□□ 0.78
LIMK2P53671 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
LIMK2P53671 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
LIMK2P53671 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LIMK2P53671 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LIMK2P53671 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LIMK2P53671 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LIMK2P53671 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.93■□□□□ 0.78
LIMK2P53671 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
LIMK2P53671 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.93■□□□□ 0.78
LIMK2P53671 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LIMK2P53671 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LIMK2P53671 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LIMK2P53671 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LIMK2P53671 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.93■□□□□ 0.78
LIMK2P53671 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LIMK2P53671 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LIMK2P53671 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LIMK2P53671 MCRIP2P1-201ENST00000394346 511 ntBASIC19.93■□□□□ 0.78
LIMK2P53671 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LIMK2P53671 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.93■□□□□ 0.78
LIMK2P53671 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.93■□□□□ 0.78
LIMK2P53671 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
LIMK2P53671 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.93■□□□□ 0.78
LIMK2P53671 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
LIMK2P53671 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
LIMK2P53671 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.93■□□□□ 0.78
LIMK2P53671 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.93■□□□□ 0.78
LIMK2P53671 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.93■□□□□ 0.78
LIMK2P53671 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LIMK2P53671 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.93■□□□□ 0.78
LIMK2P53671 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LIMK2P53671 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LIMK2P53671 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.93■□□□□ 0.78
LIMK2P53671 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LIMK2P53671 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LIMK2P53671 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LIMK2P53671 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
LIMK2P53671 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LIMK2P53671 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LIMK2P53671 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LIMK2P53671 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LIMK2P53671 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LIMK2P53671 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LIMK2P53671 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
LIMK2P53671 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LIMK2P53671 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LIMK2P53671 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.92■□□□□ 0.78
LIMK2P53671 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
LIMK2P53671 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LIMK2P53671 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LIMK2P53671 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.92■□□□□ 0.78
LIMK2P53671 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.92■□□□□ 0.78
LIMK2P53671 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LIMK2P53671 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.92■□□□□ 0.78
LIMK2P53671 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LIMK2P53671 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LIMK2P53671 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LIMK2P53671 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.92■□□□□ 0.78
LIMK2P53671 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms