Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 AC008687.6-201ENST00000596318 630 ntBASIC19.75■□□□□ 0.75
ZNF140P52738 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ZNF140P52738 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF140P52738 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF140P52738 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF140P52738 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.75■□□□□ 0.75
ZNF140P52738 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.75■□□□□ 0.75
ZNF140P52738 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF140P52738 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ZNF140P52738 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF140P52738 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF140P52738 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF140P52738 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.74■□□□□ 0.75
ZNF140P52738 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ZNF140P52738 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF140P52738 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF140P52738 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.74■□□□□ 0.75
ZNF140P52738 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
ZNF140P52738 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.74■□□□□ 0.75
ZNF140P52738 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.74■□□□□ 0.75
ZNF140P52738 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.74■□□□□ 0.75
ZNF140P52738 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.74■□□□□ 0.75
ZNF140P52738 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF140P52738 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
ZNF140P52738 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.74■□□□□ 0.75
ZNF140P52738 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.74■□□□□ 0.75
ZNF140P52738 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF140P52738 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF140P52738 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ZNF140P52738 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.74■□□□□ 0.75
ZNF140P52738 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.74■□□□□ 0.75
ZNF140P52738 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ZNF140P52738 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.74■□□□□ 0.75
ZNF140P52738 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
ZNF140P52738 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF140P52738 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF140P52738 TREX1-205ENST00000625293 1783 ntBASIC19.73■□□□□ 0.75
ZNF140P52738 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.73■□□□□ 0.75
ZNF140P52738 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF140P52738 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF140P52738 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF140P52738 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF140P52738 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF140P52738 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF140P52738 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF140P52738 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.73■□□□□ 0.75
ZNF140P52738 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF140P52738 AC008403.3-201ENST00000598924 454 ntBASIC19.73■□□□□ 0.75
ZNF140P52738 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF140P52738 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF140P52738 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
ZNF140P52738 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.73■□□□□ 0.75
ZNF140P52738 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF140P52738 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF140P52738 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF140P52738 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.73■□□□□ 0.75
ZNF140P52738 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ZNF140P52738 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF140P52738 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.72■□□□□ 0.75
ZNF140P52738 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF140P52738 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
ZNF140P52738 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.72■□□□□ 0.75
ZNF140P52738 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
ZNF140P52738 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.72■□□□□ 0.75
ZNF140P52738 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.72■□□□□ 0.75
ZNF140P52738 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.72■□□□□ 0.75
ZNF140P52738 AL121906.2-201ENST00000621597 723 ntBASIC19.72■□□□□ 0.75
ZNF140P52738 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ZNF140P52738 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF140P52738 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ZNF140P52738 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF140P52738 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ZNF140P52738 AL158211.5-201ENST00000623583 2518 ntBASIC19.71■□□□□ 0.75
ZNF140P52738 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.71■□□□□ 0.75
ZNF140P52738 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF140P52738 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF140P52738 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF140P52738 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms