Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KNTC1P50748 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
KNTC1P50748 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.87■□□□□ 0.61
KNTC1P50748 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KNTC1P50748 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
KNTC1P50748 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KNTC1P50748 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.86■□□□□ 0.61
KNTC1P50748 FAM87A-204ENST00000613235 858 ntBASIC18.86■□□□□ 0.61
KNTC1P50748 AC011558.1-201ENST00000623459 338 ntBASIC18.86■□□□□ 0.61
KNTC1P50748 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KNTC1P50748 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KNTC1P50748 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.86■□□□□ 0.61
KNTC1P50748 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.86■□□□□ 0.61
KNTC1P50748 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
KNTC1P50748 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.86■□□□□ 0.61
KNTC1P50748 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KNTC1P50748 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
KNTC1P50748 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KNTC1P50748 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.86■□□□□ 0.61
KNTC1P50748 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.86■□□□□ 0.61
KNTC1P50748 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.86■□□□□ 0.61
KNTC1P50748 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.86■□□□□ 0.61
KNTC1P50748 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.86■□□□□ 0.61
KNTC1P50748 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.86■□□□□ 0.61
KNTC1P50748 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KNTC1P50748 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.86■□□□□ 0.61
KNTC1P50748 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
KNTC1P50748 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
KNTC1P50748 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.86■□□□□ 0.61
KNTC1P50748 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KNTC1P50748 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KNTC1P50748 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.85■□□□□ 0.61
KNTC1P50748 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.85■□□□□ 0.61
KNTC1P50748 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.85■□□□□ 0.61
KNTC1P50748 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.85■□□□□ 0.61
KNTC1P50748 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KNTC1P50748 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.85■□□□□ 0.61
KNTC1P50748 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.85■□□□□ 0.61
KNTC1P50748 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KNTC1P50748 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KNTC1P50748 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
KNTC1P50748 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KNTC1P50748 INGX-201ENST00000359239 846 ntBASIC18.85■□□□□ 0.61
KNTC1P50748 KRT18P48-201ENST00000434763 852 ntBASIC18.85■□□□□ 0.61
KNTC1P50748 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.85■□□□□ 0.61
KNTC1P50748 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.85■□□□□ 0.61
KNTC1P50748 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KNTC1P50748 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KNTC1P50748 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
KNTC1P50748 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KNTC1P50748 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KNTC1P50748 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KNTC1P50748 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.84■□□□□ 0.61
KNTC1P50748 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.84■□□□□ 0.61
KNTC1P50748 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KNTC1P50748 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KNTC1P50748 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KNTC1P50748 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.84■□□□□ 0.61
KNTC1P50748 AP006587.1-201ENST00000534129 1502 ntBASIC18.84■□□□□ 0.61
KNTC1P50748 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KNTC1P50748 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KNTC1P50748 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KNTC1P50748 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KNTC1P50748 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KNTC1P50748 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KNTC1P50748 SLC25A1P4-201ENST00000567977 778 ntBASIC18.84■□□□□ 0.61
KNTC1P50748 AC130371.2-201ENST00000619443 611 ntBASIC18.84■□□□□ 0.61
KNTC1P50748 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.84■□□□□ 0.61
KNTC1P50748 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KNTC1P50748 GUSBP5-202ENST00000510805 1989 ntBASIC18.83■□□□□ 0.61
KNTC1P50748 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
KNTC1P50748 AL024507.2-201ENST00000606070 2574 ntBASIC18.83■□□□□ 0.61
KNTC1P50748 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.83■□□□□ 0.61
KNTC1P50748 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
KNTC1P50748 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KNTC1P50748 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KNTC1P50748 TSPY5P-201ENST00000426936 936 ntBASIC18.83■□□□□ 0.6
KNTC1P50748 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.83■□□□□ 0.6
KNTC1P50748 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.83■□□□□ 0.6
KNTC1P50748 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KNTC1P50748 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KNTC1P50748 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.83■□□□□ 0.6
KNTC1P50748 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.83■□□□□ 0.6
KNTC1P50748 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.83■□□□□ 0.6
KNTC1P50748 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
KNTC1P50748 AC096733.2-201ENST00000609937 1394 ntBASIC18.83■□□□□ 0.6
KNTC1P50748 Z98882.1-201ENST00000622160 2253 ntBASIC18.83■□□□□ 0.6
KNTC1P50748 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
KNTC1P50748 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
KNTC1P50748 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.82■□□□□ 0.6
KNTC1P50748 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
KNTC1P50748 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.82■□□□□ 0.6
KNTC1P50748 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
KNTC1P50748 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
KNTC1P50748 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.82■□□□□ 0.6
KNTC1P50748 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.82■□□□□ 0.6
KNTC1P50748 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KNTC1P50748 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KNTC1P50748 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KNTC1P50748 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms