Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDNFP39905 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDNFP39905 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
GDNFP39905 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.2■□□□□ 0.34
GDNFP39905 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
GDNFP39905 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.2■□□□□ 0.34
GDNFP39905 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GDNFP39905 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.2■□□□□ 0.34
GDNFP39905 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDNFP39905 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.2■□□□□ 0.34
GDNFP39905 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.2■□□□□ 0.34
GDNFP39905 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.2■□□□□ 0.34
GDNFP39905 AP001160.3-201ENST00000601484 763 ntBASIC17.2■□□□□ 0.34
GDNFP39905 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.2■□□□□ 0.34
GDNFP39905 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDNFP39905 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GDNFP39905 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDNFP39905 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDNFP39905 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GDNFP39905 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
GDNFP39905 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GDNFP39905 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.19■□□□□ 0.34
GDNFP39905 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDNFP39905 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
GDNFP39905 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GDNFP39905 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GDNFP39905 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.19■□□□□ 0.34
GDNFP39905 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDNFP39905 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
GDNFP39905 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.19■□□□□ 0.34
GDNFP39905 AC034268.1-201ENST00000441047 882 ntBASIC17.19■□□□□ 0.34
GDNFP39905 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GDNFP39905 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.19■□□□□ 0.34
GDNFP39905 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
GDNFP39905 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDNFP39905 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.19■□□□□ 0.34
GDNFP39905 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDNFP39905 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDNFP39905 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GDNFP39905 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.19■□□□□ 0.34
GDNFP39905 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GDNFP39905 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDNFP39905 BX119927.1-201ENST00000636596 1552 ntBASIC17.19■□□□□ 0.34
GDNFP39905 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDNFP39905 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GDNFP39905 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
GDNFP39905 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GDNFP39905 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
GDNFP39905 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDNFP39905 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDNFP39905 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GDNFP39905 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDNFP39905 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
GDNFP39905 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDNFP39905 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GDNFP39905 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
GDNFP39905 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.18■□□□□ 0.34
GDNFP39905 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDNFP39905 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.18■□□□□ 0.34
GDNFP39905 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.18■□□□□ 0.34
GDNFP39905 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
GDNFP39905 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GDNFP39905 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.18■□□□□ 0.34
GDNFP39905 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.18■□□□□ 0.34
GDNFP39905 SLC7A5P2-201ENST00000553010 536 ntBASIC17.18■□□□□ 0.34
GDNFP39905 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.18■□□□□ 0.34
GDNFP39905 NTF6G-201ENST00000591094 616 ntBASIC17.18■□□□□ 0.34
GDNFP39905 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GDNFP39905 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDNFP39905 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDNFP39905 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDNFP39905 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDNFP39905 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.18■□□□□ 0.34
GDNFP39905 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GDNFP39905 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDNFP39905 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GDNFP39905 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GDNFP39905 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDNFP39905 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDNFP39905 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.17■□□□□ 0.34
GDNFP39905 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
GDNFP39905 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.17■□□□□ 0.34
GDNFP39905 AL138781.2-201ENST00000617896 1843 ntBASIC17.17■□□□□ 0.34
GDNFP39905 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDNFP39905 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
GDNFP39905 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
GDNFP39905 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
GDNFP39905 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDNFP39905 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDNFP39905 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDNFP39905 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDNFP39905 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
GDNFP39905 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDNFP39905 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDNFP39905 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.17■□□□□ 0.34
GDNFP39905 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.17■□□□□ 0.34
GDNFP39905 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GDNFP39905 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.17■□□□□ 0.34
GDNFP39905 AC008175.2-201ENST00000612840 297 ntBASIC17.17■□□□□ 0.34
GDNFP39905 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms