Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC6A4P31645 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC6A4P31645 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC6A4P31645 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC6A4P31645 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC6A4P31645 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC6A4P31645 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC6A4P31645 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC6A4P31645 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
SLC6A4P31645 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
SLC6A4P31645 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC6A4P31645 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SLC6A4P31645 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC6A4P31645 KRT16P5-201ENST00000455284 522 ntBASIC20.37■□□□□ 0.85
SLC6A4P31645 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC6A4P31645 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SLC6A4P31645 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC6A4P31645 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.37■□□□□ 0.85
SLC6A4P31645 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SLC6A4P31645 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.37■□□□□ 0.85
SLC6A4P31645 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.37■□□□□ 0.85
SLC6A4P31645 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC6A4P31645 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC6A4P31645 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC6A4P31645 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC6A4P31645 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC6A4P31645 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC6A4P31645 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC6A4P31645 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SLC6A4P31645 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A4P31645 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A4P31645 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A4P31645 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC6A4P31645 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC6A4P31645 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A4P31645 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A4P31645 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A4P31645 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC6A4P31645 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A4P31645 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A4P31645 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC6A4P31645 RPS2P55-201ENST00000397318 883 ntBASIC20.36■□□□□ 0.85
SLC6A4P31645 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC6A4P31645 AC107956.1-201ENST00000494359 873 ntBASIC20.36■□□□□ 0.85
SLC6A4P31645 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A4P31645 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.36■□□□□ 0.85
SLC6A4P31645 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SLC6A4P31645 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SLC6A4P31645 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A4P31645 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A4P31645 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.36■□□□□ 0.85
SLC6A4P31645 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC6A4P31645 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A4P31645 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SLC6A4P31645 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A4P31645 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC6A4P31645 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A4P31645 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A4P31645 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
SLC6A4P31645 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.35■□□□□ 0.85
SLC6A4P31645 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A4P31645 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.35■□□□□ 0.85
SLC6A4P31645 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC6A4P31645 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC6A4P31645 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SLC6A4P31645 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC6A4P31645 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.35■□□□□ 0.85
SLC6A4P31645 AP006587.1-201ENST00000534129 1502 ntBASIC20.35■□□□□ 0.85
SLC6A4P31645 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC6A4P31645 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A4P31645 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A4P31645 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A4P31645 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC6A4P31645 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A4P31645 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC6A4P31645 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A4P31645 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC6A4P31645 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC6A4P31645 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A4P31645 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A4P31645 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SLC6A4P31645 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC6A4P31645 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A4P31645 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A4P31645 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC6A4P31645 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A4P31645 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A4P31645 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
SLC6A4P31645 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A4P31645 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A4P31645 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A4P31645 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A4P31645 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A4P31645 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A4P31645 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SLC6A4P31645 MIR718-201ENST00000390190 70 ntBASIC20.34■□□□□ 0.85
SLC6A4P31645 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A4P31645 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A4P31645 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SLC6A4P31645 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms