Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.13■□□□□ 0.49
SHC1P29353 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.13■□□□□ 0.49
SHC1P29353 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
SHC1P29353 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHC1P29353 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC1P29353 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC1P29353 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC1P29353 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.13■□□□□ 0.49
SHC1P29353 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC1P29353 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.13■□□□□ 0.49
SHC1P29353 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SHC1P29353 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
SHC1P29353 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SHC1P29353 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHC1P29353 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHC1P29353 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.12■□□□□ 0.49
SHC1P29353 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.12■□□□□ 0.49
SHC1P29353 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.12■□□□□ 0.49
SHC1P29353 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHC1P29353 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SHC1P29353 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.12■□□□□ 0.49
SHC1P29353 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.12■□□□□ 0.49
SHC1P29353 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.12■□□□□ 0.49
SHC1P29353 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.12■□□□□ 0.49
SHC1P29353 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.12■□□□□ 0.49
SHC1P29353 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHC1P29353 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SHC1P29353 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHC1P29353 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHC1P29353 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHC1P29353 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SHC1P29353 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHC1P29353 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHC1P29353 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHC1P29353 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
SHC1P29353 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHC1P29353 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHC1P29353 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHC1P29353 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHC1P29353 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.11■□□□□ 0.49
SHC1P29353 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHC1P29353 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SHC1P29353 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SHC1P29353 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SHC1P29353 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SHC1P29353 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHC1P29353 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SHC1P29353 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHC1P29353 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SHC1P29353 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.11■□□□□ 0.49
SHC1P29353 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.11■□□□□ 0.49
SHC1P29353 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SHC1P29353 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHC1P29353 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SHC1P29353 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SHC1P29353 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.1■□□□□ 0.49
SHC1P29353 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHC1P29353 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.1■□□□□ 0.49
SHC1P29353 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SHC1P29353 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHC1P29353 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.1■□□□□ 0.49
SHC1P29353 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHC1P29353 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.1■□□□□ 0.49
SHC1P29353 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.1■□□□□ 0.49
SHC1P29353 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SHC1P29353 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHC1P29353 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHC1P29353 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHC1P29353 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.1■□□□□ 0.49
SHC1P29353 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.1■□□□□ 0.49
SHC1P29353 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.1■□□□□ 0.49
SHC1P29353 AC060766.5-201ENST00000590539 871 ntBASIC18.1■□□□□ 0.49
SHC1P29353 HLA-B-256ENST00000639848 1089 ntBASIC18.1■□□□□ 0.49
SHC1P29353 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.1■□□□□ 0.49
SHC1P29353 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHC1P29353 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.1■□□□□ 0.49
SHC1P29353 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SHC1P29353 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.09■□□□□ 0.49
SHC1P29353 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHC1P29353 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHC1P29353 AC092368.3-202ENST00000574180 1591 ntBASIC18.09■□□□□ 0.49
SHC1P29353 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHC1P29353 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHC1P29353 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHC1P29353 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.09■□□□□ 0.49
SHC1P29353 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHC1P29353 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SHC1P29353 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.09■□□□□ 0.49
SHC1P29353 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.09■□□□□ 0.49
SHC1P29353 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.09■□□□□ 0.49
SHC1P29353 PNMA6B-201ENST00000538162 1200 ntBASIC18.09■□□□□ 0.49
SHC1P29353 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.09■□□□□ 0.49
SHC1P29353 MIR4651-201ENST00000582622 73 ntBASIC18.09■□□□□ 0.49
SHC1P29353 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.09■□□□□ 0.49
SHC1P29353 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.09■□□□□ 0.49
SHC1P29353 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHC1P29353 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHC1P29353 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHC1P29353 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHC1P29353 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms