Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.72■□□□□ 0.75
HTR1BP28222 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HTR1BP28222 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.72■□□□□ 0.75
HTR1BP28222 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.72■□□□□ 0.75
HTR1BP28222 Z99916.2-201ENST00000604037 246 ntBASIC19.72■□□□□ 0.75
HTR1BP28222 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
HTR1BP28222 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HTR1BP28222 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
HTR1BP28222 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HTR1BP28222 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HTR1BP28222 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HTR1BP28222 AC124283.5-201ENST00000624661 1809 ntBASIC19.72■□□□□ 0.75
HTR1BP28222 DPP3P2-201ENST00000416030 1696 ntBASIC19.71■□□□□ 0.75
HTR1BP28222 AC092720.2-201ENST00000602388 1665 ntBASIC19.71■□□□□ 0.75
HTR1BP28222 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1BP28222 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1BP28222 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1BP28222 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1BP28222 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1BP28222 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1BP28222 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.71■□□□□ 0.75
HTR1BP28222 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HTR1BP28222 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1BP28222 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
HTR1BP28222 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HTR1BP28222 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1BP28222 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.71■□□□□ 0.75
HTR1BP28222 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.71■□□□□ 0.75
HTR1BP28222 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.71■□□□□ 0.75
HTR1BP28222 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1BP28222 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1BP28222 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.71■□□□□ 0.75
HTR1BP28222 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.71■□□□□ 0.75
HTR1BP28222 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1BP28222 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1BP28222 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
HTR1BP28222 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
HTR1BP28222 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1BP28222 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.7■□□□□ 0.74
HTR1BP28222 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1BP28222 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1BP28222 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1BP28222 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1BP28222 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1BP28222 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.7■□□□□ 0.74
HTR1BP28222 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HTR1BP28222 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.7■□□□□ 0.74
HTR1BP28222 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HTR1BP28222 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
HTR1BP28222 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1BP28222 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HTR1BP28222 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.7■□□□□ 0.74
HTR1BP28222 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.7■□□□□ 0.74
HTR1BP28222 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.7■□□□□ 0.74
HTR1BP28222 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.7■□□□□ 0.74
HTR1BP28222 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.7■□□□□ 0.74
HTR1BP28222 MIR4497-201ENST00000583208 89 ntBASIC19.7■□□□□ 0.74
HTR1BP28222 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.7■□□□□ 0.74
HTR1BP28222 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1BP28222 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1BP28222 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTR1BP28222 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTR1BP28222 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.69■□□□□ 0.74
HTR1BP28222 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTR1BP28222 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTR1BP28222 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.69■□□□□ 0.74
HTR1BP28222 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.69■□□□□ 0.74
HTR1BP28222 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTR1BP28222 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HTR1BP28222 RPS2P55-201ENST00000397318 883 ntBASIC19.69■□□□□ 0.74
HTR1BP28222 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.69■□□□□ 0.74
HTR1BP28222 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTR1BP28222 AC107956.1-201ENST00000494359 873 ntBASIC19.69■□□□□ 0.74
HTR1BP28222 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.69■□□□□ 0.74
HTR1BP28222 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTR1BP28222 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTR1BP28222 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTR1BP28222 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.69■□□□□ 0.74
HTR1BP28222 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTR1BP28222 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.69■□□□□ 0.74
HTR1BP28222 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
HTR1BP28222 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTR1BP28222 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.69■□□□□ 0.74
HTR1BP28222 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTR1BP28222 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HTR1BP28222 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTR1BP28222 LINC01006-201ENST00000333319 2292 ntBASIC19.68■□□□□ 0.74
HTR1BP28222 NBPF21P-201ENST00000425093 1451 ntBASIC19.68■□□□□ 0.74
HTR1BP28222 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTR1BP28222 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTR1BP28222 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HTR1BP28222 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.68■□□□□ 0.74
HTR1BP28222 RARRES2P10-201ENST00000564312 460 ntBASIC19.68■□□□□ 0.74
HTR1BP28222 AC233702.5-201ENST00000584107 538 ntBASIC19.68■□□□□ 0.74
HTR1BP28222 AC004264.1-201ENST00000608354 794 ntBASIC19.68■□□□□ 0.74
HTR1BP28222 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.68■□□□□ 0.74
HTR1BP28222 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTR1BP28222 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.68■□□□□ 0.74
HTR1BP28222 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTR1BP28222 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms