Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN3P26045 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN3P26045 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PTPN3P26045 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN3P26045 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.2■□□□□ 0.82
PTPN3P26045 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN3P26045 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN3P26045 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN3P26045 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.2■□□□□ 0.82
PTPN3P26045 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN3P26045 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN3P26045 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN3P26045 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN3P26045 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN3P26045 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.2■□□□□ 0.82
PTPN3P26045 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.2■□□□□ 0.82
PTPN3P26045 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN3P26045 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.2■□□□□ 0.82
PTPN3P26045 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.2■□□□□ 0.82
PTPN3P26045 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN3P26045 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.2■□□□□ 0.82
PTPN3P26045 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN3P26045 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.2■□□□□ 0.82
PTPN3P26045 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.2■□□□□ 0.82
PTPN3P26045 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN3P26045 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN3P26045 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPN3P26045 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN3P26045 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN3P26045 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN3P26045 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPN3P26045 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PTPN3P26045 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN3P26045 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPN3P26045 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN3P26045 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PTPN3P26045 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.19■□□□□ 0.82
PTPN3P26045 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN3P26045 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPN3P26045 AC092368.3-202ENST00000574180 1591 ntBASIC20.19■□□□□ 0.82
PTPN3P26045 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPN3P26045 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPN3P26045 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN3P26045 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPN3P26045 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN3P26045 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN3P26045 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN3P26045 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN3P26045 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN3P26045 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN3P26045 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN3P26045 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN3P26045 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.18■□□□□ 0.82
PTPN3P26045 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN3P26045 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN3P26045 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN3P26045 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN3P26045 AL355802.2-201ENST00000402069 882 ntBASIC20.18■□□□□ 0.82
PTPN3P26045 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.18■□□□□ 0.82
PTPN3P26045 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PTPN3P26045 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.18■□□□□ 0.82
PTPN3P26045 AC060766.5-201ENST00000590539 871 ntBASIC20.18■□□□□ 0.82
PTPN3P26045 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.18■□□□□ 0.82
PTPN3P26045 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN3P26045 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN3P26045 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.18■□□□□ 0.82
PTPN3P26045 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.18■□□□□ 0.82
PTPN3P26045 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.18■□□□□ 0.82
PTPN3P26045 AC018553.1-201ENST00000616682 1458 ntBASIC20.18■□□□□ 0.82
PTPN3P26045 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN3P26045 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN3P26045 AC116351.2-201ENST00000606540 1585 ntBASIC20.17■□□□□ 0.82
PTPN3P26045 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.17■□□□□ 0.82
PTPN3P26045 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PTPN3P26045 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PTPN3P26045 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN3P26045 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.17■□□□□ 0.82
PTPN3P26045 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.17■□□□□ 0.82
PTPN3P26045 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.17■□□□□ 0.82
PTPN3P26045 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN3P26045 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.17■□□□□ 0.82
PTPN3P26045 PNMA6B-201ENST00000538162 1200 ntBASIC20.17■□□□□ 0.82
PTPN3P26045 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.17■□□□□ 0.82
PTPN3P26045 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN3P26045 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.17■□□□□ 0.82
PTPN3P26045 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PTPN3P26045 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.17■□□□□ 0.82
PTPN3P26045 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN3P26045 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN3P26045 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PTPN3P26045 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PTPN3P26045 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN3P26045 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN3P26045 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.17■□□□□ 0.82
PTPN3P26045 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN3P26045 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PTPN3P26045 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN3P26045 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PTPN3P26045 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PTPN3P26045 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms