Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 HLA-A-201ENST00000376802 1334 ntBASIC16.17■□□□□ 0.18
NF1P21359 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NF1P21359 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NF1P21359 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.17■□□□□ 0.18
NF1P21359 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NF1P21359 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NF1P21359 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.17■□□□□ 0.18
NF1P21359 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.17■□□□□ 0.18
NF1P21359 AL512604.3-201ENST00000569583 964 ntBASIC16.17■□□□□ 0.18
NF1P21359 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.17■□□□□ 0.18
NF1P21359 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.17■□□□□ 0.18
NF1P21359 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NF1P21359 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NF1P21359 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NF1P21359 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.17■□□□□ 0.18
NF1P21359 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NF1P21359 AC004870.1-201ENST00000315132 882 ntBASIC16.17■□□□□ 0.18
NF1P21359 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NF1P21359 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NF1P21359 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.17■□□□□ 0.18
NF1P21359 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NF1P21359 PRSS44-201ENST00000515154 1146 ntBASIC16.17■□□□□ 0.18
NF1P21359 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.17■□□□□ 0.18
NF1P21359 AL136038.3-201ENST00000561909 1096 ntBASIC16.17■□□□□ 0.18
NF1P21359 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
NF1P21359 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.17■□□□□ 0.18
NF1P21359 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NF1P21359 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NF1P21359 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.17■□□□□ 0.18
NF1P21359 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NF1P21359 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.16■□□□□ 0.18
NF1P21359 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.16■□□□□ 0.18
NF1P21359 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NF1P21359 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
NF1P21359 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.16■□□□□ 0.18
NF1P21359 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.16■□□□□ 0.18
NF1P21359 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.16■□□□□ 0.18
NF1P21359 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.16■□□□□ 0.18
NF1P21359 IFNL4P1-201ENST00000607083 540 ntBASIC16.16■□□□□ 0.18
NF1P21359 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.16■□□□□ 0.18
NF1P21359 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.16■□□□□ 0.18
NF1P21359 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.16■□□□□ 0.18
NF1P21359 AC092338.2-201ENST00000568827 1415 ntBASIC16.16■□□□□ 0.18
NF1P21359 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.16■□□□□ 0.18
NF1P21359 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
NF1P21359 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NF1P21359 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NF1P21359 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.16■□□□□ 0.18
NF1P21359 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.16■□□□□ 0.18
NF1P21359 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
NF1P21359 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.16■□□□□ 0.18
NF1P21359 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.16■□□□□ 0.18
NF1P21359 AL023803.3-201ENST00000615559 522 ntBASIC16.16■□□□□ 0.18
NF1P21359 AC141257.4-201ENST00000634557 245 ntBASIC16.16■□□□□ 0.18
NF1P21359 AC136944.6-201ENST00000634818 245 ntBASIC16.16■□□□□ 0.18
NF1P21359 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NF1P21359 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
NF1P21359 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NF1P21359 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NF1P21359 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NF1P21359 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NF1P21359 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NF1P21359 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NF1P21359 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NF1P21359 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.15■□□□□ 0.18
NF1P21359 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NF1P21359 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NF1P21359 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NF1P21359 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NF1P21359 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.15■□□□□ 0.18
NF1P21359 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.15■□□□□ 0.18
NF1P21359 AC079776.4-201ENST00000511039 504 ntBASIC16.15■□□□□ 0.18
NF1P21359 AL441883.1-201ENST00000566170 1045 ntBASIC16.15■□□□□ 0.18
NF1P21359 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.15■□□□□ 0.18
NF1P21359 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.15■□□□□ 0.18
NF1P21359 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
NF1P21359 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NF1P21359 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NF1P21359 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
NF1P21359 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NF1P21359 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NF1P21359 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.15■□□□□ 0.18
NF1P21359 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.15■□□□□ 0.18
NF1P21359 AC120114.3-201ENST00000611923 658 ntBASIC16.15■□□□□ 0.18
NF1P21359 AL031432.5-201ENST00000641059 760 ntBASIC16.15■□□□□ 0.18
NF1P21359 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NF1P21359 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NF1P21359 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.15■□□□□ 0.18
NF1P21359 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NF1P21359 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NF1P21359 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.15■□□□□ 0.18
NF1P21359 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NF1P21359 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NF1P21359 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NF1P21359 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NF1P21359 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.14■□□□□ 0.17
NF1P21359 AC011506.1-201ENST00000474329 610 ntBASIC16.14■□□□□ 0.17
NF1P21359 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NF1P21359 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NF1P21359 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms