Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.1■□□□□ 0.81
COL4A2P08572 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL4A2P08572 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.1■□□□□ 0.81
COL4A2P08572 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A2P08572 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A2P08572 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A2P08572 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.09■□□□□ 0.81
COL4A2P08572 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A2P08572 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A2P08572 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A2P08572 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A2P08572 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
COL4A2P08572 YBX1P2-201ENST00000489612 999 ntBASIC20.09■□□□□ 0.81
COL4A2P08572 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.09■□□□□ 0.81
COL4A2P08572 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
COL4A2P08572 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A2P08572 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
COL4A2P08572 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
COL4A2P08572 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A2P08572 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL4A2P08572 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
COL4A2P08572 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A2P08572 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A2P08572 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A2P08572 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A2P08572 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A2P08572 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.08■□□□□ 0.81
COL4A2P08572 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A2P08572 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.08■□□□□ 0.81
COL4A2P08572 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL4A2P08572 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.08■□□□□ 0.81
COL4A2P08572 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.08■□□□□ 0.81
COL4A2P08572 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
COL4A2P08572 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL4A2P08572 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
COL4A2P08572 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
COL4A2P08572 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A2P08572 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.07■□□□□ 0.8
COL4A2P08572 MFAP1P1-201ENST00000442257 1255 ntBASIC20.07■□□□□ 0.8
COL4A2P08572 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.07■□□□□ 0.8
COL4A2P08572 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.07■□□□□ 0.8
COL4A2P08572 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.07■□□□□ 0.8
COL4A2P08572 AC131212.4-201ENST00000623606 975 ntBASIC20.07■□□□□ 0.8
COL4A2P08572 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A2P08572 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A2P08572 EP400NL-214ENST00000641289 2402 ntBASIC20.07■□□□□ 0.8
COL4A2P08572 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A2P08572 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A2P08572 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
COL4A2P08572 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A2P08572 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A2P08572 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
COL4A2P08572 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A2P08572 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.07■□□□□ 0.8
COL4A2P08572 ATP5G1P1-201ENST00000448724 379 ntBASIC20.07■□□□□ 0.8
COL4A2P08572 Z85996.1-201ENST00000494644 937 ntBASIC20.07■□□□□ 0.8
COL4A2P08572 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.07■□□□□ 0.8
COL4A2P08572 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
COL4A2P08572 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A2P08572 AL358472.4-201ENST00000633140 710 ntBASIC20.07■□□□□ 0.8
COL4A2P08572 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A2P08572 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.07■□□□□ 0.8
COL4A2P08572 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.07■□□□□ 0.8
COL4A2P08572 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL4A2P08572 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL4A2P08572 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL4A2P08572 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.06■□□□□ 0.8
COL4A2P08572 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL4A2P08572 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL4A2P08572 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
COL4A2P08572 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
COL4A2P08572 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL4A2P08572 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
COL4A2P08572 AL031133.1-201ENST00000406807 723 ntBASIC20.06■□□□□ 0.8
COL4A2P08572 AC007663.1-201ENST00000438948 1240 ntBASIC20.06■□□□□ 0.8
COL4A2P08572 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL4A2P08572 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.06■□□□□ 0.8
COL4A2P08572 AC011298.2-201ENST00000617989 482 ntBASIC20.06■□□□□ 0.8
COL4A2P08572 AL138966.2-201ENST00000621997 464 ntBASIC20.06■□□□□ 0.8
COL4A2P08572 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
COL4A2P08572 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL4A2P08572 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL4A2P08572 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL4A2P08572 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.06■□□□□ 0.8
COL4A2P08572 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.06■□□□□ 0.8
COL4A2P08572 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL4A2P08572 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.05■□□□□ 0.8
COL4A2P08572 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.05■□□□□ 0.8
COL4A2P08572 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.05■□□□□ 0.8
COL4A2P08572 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
COL4A2P08572 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.05■□□□□ 0.8
COL4A2P08572 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
COL4A2P08572 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL4A2P08572 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL4A2P08572 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
COL4A2P08572 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.05■□□□□ 0.8
COL4A2P08572 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.05■□□□□ 0.8
COL4A2P08572 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL4A2P08572 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL4A2P08572 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms