Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC22.99■■□□□ 1.27
CTDNEP1O95476 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
CTDNEP1O95476 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CTDNEP1O95476 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
CTDNEP1O95476 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.98■■□□□ 1.27
CTDNEP1O95476 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
CTDNEP1O95476 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC22.98■■□□□ 1.27
CTDNEP1O95476 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.98■■□□□ 1.27
CTDNEP1O95476 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CTDNEP1O95476 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CTDNEP1O95476 HLA-L-209ENST00000420110 1011 ntBASIC22.98■■□□□ 1.27
CTDNEP1O95476 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.98■■□□□ 1.27
CTDNEP1O95476 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.98■■□□□ 1.27
CTDNEP1O95476 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.98■■□□□ 1.27
CTDNEP1O95476 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.98■■□□□ 1.27
CTDNEP1O95476 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CTDNEP1O95476 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC22.98■■□□□ 1.27
CTDNEP1O95476 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC22.98■■□□□ 1.27
CTDNEP1O95476 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CTDNEP1O95476 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.98■■□□□ 1.27
CTDNEP1O95476 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CTDNEP1O95476 TFP1-202ENST00000475455 1573 ntBASIC22.97■■□□□ 1.27
CTDNEP1O95476 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CTDNEP1O95476 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC22.97■■□□□ 1.27
CTDNEP1O95476 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CTDNEP1O95476 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
CTDNEP1O95476 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CTDNEP1O95476 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.97■■□□□ 1.27
CTDNEP1O95476 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CTDNEP1O95476 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
CTDNEP1O95476 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CTDNEP1O95476 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CTDNEP1O95476 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CTDNEP1O95476 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC22.97■■□□□ 1.27
CTDNEP1O95476 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CTDNEP1O95476 AC092368.3-202ENST00000574180 1591 ntBASIC22.97■■□□□ 1.27
CTDNEP1O95476 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.97■■□□□ 1.27
CTDNEP1O95476 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CTDNEP1O95476 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CTDNEP1O95476 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CTDNEP1O95476 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
CTDNEP1O95476 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CTDNEP1O95476 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CTDNEP1O95476 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CTDNEP1O95476 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC22.96■■□□□ 1.27
CTDNEP1O95476 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.96■■□□□ 1.27
CTDNEP1O95476 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CTDNEP1O95476 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.96■■□□□ 1.27
CTDNEP1O95476 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.96■■□□□ 1.27
CTDNEP1O95476 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.96■■□□□ 1.27
CTDNEP1O95476 PNMA6B-201ENST00000538162 1200 ntBASIC22.96■■□□□ 1.27
CTDNEP1O95476 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.96■■□□□ 1.27
CTDNEP1O95476 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.96■■□□□ 1.27
CTDNEP1O95476 AC133041.1-202ENST00000642053 222 ntBASIC22.96■■□□□ 1.27
CTDNEP1O95476 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
CTDNEP1O95476 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CTDNEP1O95476 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.96■■□□□ 1.27
CTDNEP1O95476 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.96■■□□□ 1.27
CTDNEP1O95476 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.96■■□□□ 1.27
CTDNEP1O95476 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.96■■□□□ 1.27
CTDNEP1O95476 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CTDNEP1O95476 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
CTDNEP1O95476 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC22.96■■□□□ 1.27
CTDNEP1O95476 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CTDNEP1O95476 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.27
CTDNEP1O95476 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.95■■□□□ 1.27
CTDNEP1O95476 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CTDNEP1O95476 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CTDNEP1O95476 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CTDNEP1O95476 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CTDNEP1O95476 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CTDNEP1O95476 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CTDNEP1O95476 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
CTDNEP1O95476 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.95■■□□□ 1.26
CTDNEP1O95476 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.95■■□□□ 1.26
CTDNEP1O95476 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
CTDNEP1O95476 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.95■■□□□ 1.26
CTDNEP1O95476 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC22.95■■□□□ 1.26
CTDNEP1O95476 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
CTDNEP1O95476 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
CTDNEP1O95476 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
CTDNEP1O95476 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.95■■□□□ 1.26
CTDNEP1O95476 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.95■■□□□ 1.26
CTDNEP1O95476 AC060766.5-201ENST00000590539 871 ntBASIC22.95■■□□□ 1.26
CTDNEP1O95476 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
CTDNEP1O95476 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CTDNEP1O95476 TP73-202ENST00000354437 2140 ntTSL 5 BASIC22.94■■□□□ 1.26
CTDNEP1O95476 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
CTDNEP1O95476 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CTDNEP1O95476 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CTDNEP1O95476 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CTDNEP1O95476 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CTDNEP1O95476 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC22.94■■□□□ 1.26
CTDNEP1O95476 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.94■■□□□ 1.26
CTDNEP1O95476 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC22.94■■□□□ 1.26
CTDNEP1O95476 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CTDNEP1O95476 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
CTDNEP1O95476 AL390719.1-204ENST00000412397 1219 ntBASIC22.94■■□□□ 1.26
CTDNEP1O95476 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.94■■□□□ 1.26
CTDNEP1O95476 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms