Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.27■□□□□ 0.84
CLDN11O75508 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CLDN11O75508 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN11O75508 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN11O75508 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CLDN11O75508 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN11O75508 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN11O75508 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN11O75508 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.27■□□□□ 0.84
CLDN11O75508 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.27■□□□□ 0.84
CLDN11O75508 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.27■□□□□ 0.84
CLDN11O75508 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.27■□□□□ 0.84
CLDN11O75508 AC004264.1-201ENST00000608354 794 ntBASIC20.27■□□□□ 0.84
CLDN11O75508 AC066615.1-201ENST00000640911 628 ntBASIC20.27■□□□□ 0.84
CLDN11O75508 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN11O75508 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN11O75508 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.27■□□□□ 0.84
CLDN11O75508 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN11O75508 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLDN11O75508 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CLDN11O75508 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLDN11O75508 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CLDN11O75508 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.83
CLDN11O75508 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLDN11O75508 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.26■□□□□ 0.83
CLDN11O75508 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN11O75508 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN11O75508 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN11O75508 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN11O75508 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN11O75508 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CLDN11O75508 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN11O75508 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.26■□□□□ 0.83
CLDN11O75508 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.26■□□□□ 0.83
CLDN11O75508 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.26■□□□□ 0.83
CLDN11O75508 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN11O75508 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
CLDN11O75508 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN11O75508 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.26■□□□□ 0.83
CLDN11O75508 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
CLDN11O75508 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.26■□□□□ 0.83
CLDN11O75508 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
CLDN11O75508 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN11O75508 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN11O75508 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CLDN11O75508 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN11O75508 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN11O75508 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.25■□□□□ 0.83
CLDN11O75508 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.25■□□□□ 0.83
CLDN11O75508 KRT16P5-201ENST00000455284 522 ntBASIC20.25■□□□□ 0.83
CLDN11O75508 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN11O75508 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.25■□□□□ 0.83
CLDN11O75508 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN11O75508 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN11O75508 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN11O75508 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN11O75508 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN11O75508 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CLDN11O75508 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN11O75508 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN11O75508 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN11O75508 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.25■□□□□ 0.83
CLDN11O75508 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.24■□□□□ 0.83
CLDN11O75508 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN11O75508 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN11O75508 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN11O75508 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.24■□□□□ 0.83
CLDN11O75508 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN11O75508 YBX1P10-201ENST00000444752 975 ntBASIC20.24■□□□□ 0.83
CLDN11O75508 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CLDN11O75508 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.24■□□□□ 0.83
CLDN11O75508 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.24■□□□□ 0.83
CLDN11O75508 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN11O75508 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.24■□□□□ 0.83
CLDN11O75508 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.24■□□□□ 0.83
CLDN11O75508 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.24■□□□□ 0.83
CLDN11O75508 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN11O75508 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.24■□□□□ 0.83
CLDN11O75508 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN11O75508 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN11O75508 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CLDN11O75508 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN11O75508 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN11O75508 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN11O75508 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN11O75508 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN11O75508 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.23■□□□□ 0.83
CLDN11O75508 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN11O75508 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CLDN11O75508 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CLDN11O75508 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN11O75508 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN11O75508 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN11O75508 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN11O75508 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
CLDN11O75508 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN11O75508 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN11O75508 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN11O75508 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.23■□□□□ 0.83
CLDN11O75508 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms