Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.85■□□□□ 0.45
PTP4A3O75365 PHGDH-210ENST00000641115 1638 ntBASIC17.85■□□□□ 0.45
PTP4A3O75365 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTP4A3O75365 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.85■□□□□ 0.45
PTP4A3O75365 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTP4A3O75365 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A3O75365 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A3O75365 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PTP4A3O75365 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A3O75365 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PTP4A3O75365 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.84■□□□□ 0.45
PTP4A3O75365 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A3O75365 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A3O75365 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PTP4A3O75365 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PTP4A3O75365 AC022517.1-201ENST00000592429 346 ntBASIC17.84■□□□□ 0.45
PTP4A3O75365 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PTP4A3O75365 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.84■□□□□ 0.45
PTP4A3O75365 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A3O75365 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A3O75365 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A3O75365 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTP4A3O75365 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTP4A3O75365 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PTP4A3O75365 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.83■□□□□ 0.45
PTP4A3O75365 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTP4A3O75365 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PTP4A3O75365 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTP4A3O75365 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTP4A3O75365 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTP4A3O75365 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.45
PTP4A3O75365 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A3O75365 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
PTP4A3O75365 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A3O75365 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.83■□□□□ 0.44
PTP4A3O75365 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
PTP4A3O75365 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.83■□□□□ 0.44
PTP4A3O75365 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.83■□□□□ 0.44
PTP4A3O75365 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A3O75365 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A3O75365 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.83■□□□□ 0.44
PTP4A3O75365 AP000974.1-201ENST00000623909 2387 ntBASIC17.83■□□□□ 0.44
PTP4A3O75365 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A3O75365 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.83■□□□□ 0.44
PTP4A3O75365 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A3O75365 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A3O75365 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A3O75365 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTP4A3O75365 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
PTP4A3O75365 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A3O75365 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A3O75365 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A3O75365 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A3O75365 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.82■□□□□ 0.44
PTP4A3O75365 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A3O75365 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.82■□□□□ 0.44
PTP4A3O75365 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A3O75365 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A3O75365 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PTP4A3O75365 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A3O75365 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PTP4A3O75365 AC004911.1-201ENST00000416316 871 ntBASIC17.82■□□□□ 0.44
PTP4A3O75365 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
PTP4A3O75365 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A3O75365 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PTP4A3O75365 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A3O75365 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A3O75365 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A3O75365 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A3O75365 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.82■□□□□ 0.44
PTP4A3O75365 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A3O75365 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A3O75365 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.82■□□□□ 0.44
PTP4A3O75365 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTP4A3O75365 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTP4A3O75365 LETM1P2-201ENST00000597330 2178 ntBASIC17.81■□□□□ 0.44
PTP4A3O75365 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTP4A3O75365 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTP4A3O75365 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTP4A3O75365 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTP4A3O75365 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
PTP4A3O75365 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTP4A3O75365 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTP4A3O75365 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PTP4A3O75365 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTP4A3O75365 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.81■□□□□ 0.44
PTP4A3O75365 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTP4A3O75365 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.81■□□□□ 0.44
PTP4A3O75365 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.81■□□□□ 0.44
PTP4A3O75365 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.81■□□□□ 0.44
PTP4A3O75365 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.81■□□□□ 0.44
PTP4A3O75365 AC133552.2-202ENST00000575694 574 ntBASIC17.81■□□□□ 0.44
PTP4A3O75365 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.81■□□□□ 0.44
PTP4A3O75365 AC005181.1-201ENST00000604782 1256 ntBASIC17.81■□□□□ 0.44
PTP4A3O75365 MIR5787-201ENST00000611784 55 ntBASIC17.81■□□□□ 0.44
PTP4A3O75365 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTP4A3O75365 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
PTP4A3O75365 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.81■□□□□ 0.44
PTP4A3O75365 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTP4A3O75365 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms