Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NOBOXO60393 KRASP1-201ENST00000407852 552 ntBASIC19.59■□□□□ 0.73
NOBOXO60393 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NOBOXO60393 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NOBOXO60393 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NOBOXO60393 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.59■□□□□ 0.73
NOBOXO60393 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.59■□□□□ 0.73
NOBOXO60393 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.59■□□□□ 0.73
NOBOXO60393 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.59■□□□□ 0.73
NOBOXO60393 AC110285.5-201ENST00000611501 352 ntBASIC19.59■□□□□ 0.73
NOBOXO60393 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NOBOXO60393 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NOBOXO60393 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NOBOXO60393 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NOBOXO60393 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NOBOXO60393 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NOBOXO60393 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NOBOXO60393 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
NOBOXO60393 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
NOBOXO60393 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NOBOXO60393 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NOBOXO60393 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.58■□□□□ 0.73
NOBOXO60393 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
NOBOXO60393 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NOBOXO60393 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NOBOXO60393 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NOBOXO60393 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NOBOXO60393 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NOBOXO60393 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NOBOXO60393 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NOBOXO60393 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
NOBOXO60393 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NOBOXO60393 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.58■□□□□ 0.72
NOBOXO60393 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NOBOXO60393 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.58■□□□□ 0.72
NOBOXO60393 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.58■□□□□ 0.72
NOBOXO60393 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NOBOXO60393 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NOBOXO60393 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
NOBOXO60393 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NOBOXO60393 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NOBOXO60393 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NOBOXO60393 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NOBOXO60393 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NOBOXO60393 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.58■□□□□ 0.72
NOBOXO60393 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NOBOXO60393 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NOBOXO60393 PLK5-205ENST00000642079 1969 ntBASIC19.57■□□□□ 0.72
NOBOXO60393 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NOBOXO60393 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NOBOXO60393 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NOBOXO60393 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NOBOXO60393 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NOBOXO60393 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NOBOXO60393 AC006128.1-201ENST00000624704 1661 ntBASIC19.57■□□□□ 0.72
NOBOXO60393 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NOBOXO60393 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.57■□□□□ 0.72
NOBOXO60393 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NOBOXO60393 AC012618.2-201ENST00000428058 849 ntBASIC19.57■□□□□ 0.72
NOBOXO60393 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.57■□□□□ 0.72
NOBOXO60393 SNORA78-201ENST00000459373 127 ntBASIC19.57■□□□□ 0.72
NOBOXO60393 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.57■□□□□ 0.72
NOBOXO60393 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NOBOXO60393 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
NOBOXO60393 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.57■□□□□ 0.72
NOBOXO60393 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
NOBOXO60393 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NOBOXO60393 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NOBOXO60393 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NOBOXO60393 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.57■□□□□ 0.72
NOBOXO60393 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NOBOXO60393 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NOBOXO60393 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NOBOXO60393 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.57■□□□□ 0.72
NOBOXO60393 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NOBOXO60393 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.56■□□□□ 0.72
NOBOXO60393 AFG3L1P-217ENST00000557444 2447 ntBASIC19.56■□□□□ 0.72
NOBOXO60393 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.56■□□□□ 0.72
NOBOXO60393 AC073314.1-201ENST00000568729 2216 ntBASIC19.56■□□□□ 0.72
NOBOXO60393 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
NOBOXO60393 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NOBOXO60393 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.56■□□□□ 0.72
NOBOXO60393 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.56■□□□□ 0.72
NOBOXO60393 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NOBOXO60393 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NOBOXO60393 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NOBOXO60393 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.56■□□□□ 0.72
NOBOXO60393 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NOBOXO60393 ECEL1P3-201ENST00000427961 737 ntBASIC19.56■□□□□ 0.72
NOBOXO60393 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.56■□□□□ 0.72
NOBOXO60393 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NOBOXO60393 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.56■□□□□ 0.72
NOBOXO60393 AC233702.5-201ENST00000584107 538 ntBASIC19.56■□□□□ 0.72
NOBOXO60393 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NOBOXO60393 AC073912.3-201ENST00000624414 853 ntBASIC19.56■□□□□ 0.72
NOBOXO60393 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.56■□□□□ 0.72
NOBOXO60393 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NOBOXO60393 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NOBOXO60393 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NOBOXO60393 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms