Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AC012306.2-201ENST00000609350 630 ntBASIC19.06■□□□□ 0.64
SLC28A2O43868 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.06■□□□□ 0.64
SLC28A2O43868 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.06■□□□□ 0.64
SLC28A2O43868 AL049637.2-201ENST00000641778 930 ntBASIC19.06■□□□□ 0.64
SLC28A2O43868 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.06■□□□□ 0.64
SLC28A2O43868 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC28A2O43868 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC28A2O43868 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC28A2O43868 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.06■□□□□ 0.64
SLC28A2O43868 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SLC28A2O43868 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC28A2O43868 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC28A2O43868 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SLC28A2O43868 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SLC28A2O43868 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC28A2O43868 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC28A2O43868 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC28A2O43868 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC28A2O43868 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC28A2O43868 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SLC28A2O43868 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC28A2O43868 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.05■□□□□ 0.64
SLC28A2O43868 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC28A2O43868 TSPY15P-201ENST00000457163 923 ntBASIC19.05■□□□□ 0.64
SLC28A2O43868 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.05■□□□□ 0.64
SLC28A2O43868 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.05■□□□□ 0.64
SLC28A2O43868 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC28A2O43868 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC28A2O43868 SOX15-203ENST00000570788 1093 ntBASIC19.05■□□□□ 0.64
SLC28A2O43868 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.05■□□□□ 0.64
SLC28A2O43868 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.05■□□□□ 0.64
SLC28A2O43868 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SLC28A2O43868 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SLC28A2O43868 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.05■□□□□ 0.64
SLC28A2O43868 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC28A2O43868 RBM17P2-201ENST00000616397 1405 ntBASIC19.05■□□□□ 0.64
SLC28A2O43868 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC28A2O43868 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC28A2O43868 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SLC28A2O43868 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC28A2O43868 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC28A2O43868 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC28A2O43868 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC28A2O43868 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SLC28A2O43868 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.04■□□□□ 0.64
SLC28A2O43868 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SLC28A2O43868 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC28A2O43868 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC28A2O43868 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC28A2O43868 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SLC28A2O43868 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC28A2O43868 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC28A2O43868 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC28A2O43868 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC28A2O43868 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.04■□□□□ 0.64
SLC28A2O43868 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC28A2O43868 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
SLC28A2O43868 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC28A2O43868 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC28A2O43868 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC28A2O43868 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC28A2O43868 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC28A2O43868 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC28A2O43868 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.04■□□□□ 0.64
SLC28A2O43868 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
SLC28A2O43868 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC28A2O43868 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC28A2O43868 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.04■□□□□ 0.64
SLC28A2O43868 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC28A2O43868 AL162377.1-201ENST00000618844 1793 ntBASIC19.04■□□□□ 0.64
SLC28A2O43868 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC28A2O43868 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SLC28A2O43868 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC28A2O43868 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC28A2O43868 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC28A2O43868 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC28A2O43868 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC28A2O43868 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SLC28A2O43868 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.03■□□□□ 0.64
SLC28A2O43868 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.03■□□□□ 0.64
SLC28A2O43868 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC28A2O43868 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC28A2O43868 MIR2861-201ENST00000636310 90 ntBASIC19.03■□□□□ 0.64
SLC28A2O43868 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC28A2O43868 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC28A2O43868 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SLC28A2O43868 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC28A2O43868 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SLC28A2O43868 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC28A2O43868 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC28A2O43868 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLC28A2O43868 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.02■□□□□ 0.64
SLC28A2O43868 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC28A2O43868 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC28A2O43868 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
SLC28A2O43868 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLC28A2O43868 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SLC28A2O43868 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC28A2O43868 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC28A2O43868 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms