Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SRGAP3O43295 AC239809.2-201ENST00000415381 517 ntBASIC24.62■■□□□ 1.53
SRGAP3O43295 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC24.62■■□□□ 1.53
SRGAP3O43295 AL158047.1-201ENST00000445918 881 ntBASIC24.62■■□□□ 1.53
SRGAP3O43295 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC24.62■■□□□ 1.53
SRGAP3O43295 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC24.62■■□□□ 1.53
SRGAP3O43295 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC24.62■■□□□ 1.53
SRGAP3O43295 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC24.62■■□□□ 1.53
SRGAP3O43295 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
SRGAP3O43295 PRKY-204ENST00000533551 1019 ntBASIC24.62■■□□□ 1.53
SRGAP3O43295 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC24.62■■□□□ 1.53
SRGAP3O43295 AC124016.1-201ENST00000609552 612 ntBASIC24.62■■□□□ 1.53
SRGAP3O43295 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC24.62■■□□□ 1.53
SRGAP3O43295 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SRGAP3O43295 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC24.62■■□□□ 1.53
SRGAP3O43295 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC24.62■■□□□ 1.53
SRGAP3O43295 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC24.62■■□□□ 1.53
SRGAP3O43295 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC24.62■■□□□ 1.53
SRGAP3O43295 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
SRGAP3O43295 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
SRGAP3O43295 GOLGA2P11-201ENST00000562660 1621 ntBASIC24.61■■□□□ 1.53
SRGAP3O43295 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SRGAP3O43295 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC24.61■■□□□ 1.53
SRGAP3O43295 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.61■■□□□ 1.53
SRGAP3O43295 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
SRGAP3O43295 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SRGAP3O43295 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SRGAP3O43295 TREX2-204ENST00000370212 861 ntTSL 5 BASIC24.61■■□□□ 1.53
SRGAP3O43295 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
SRGAP3O43295 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
SRGAP3O43295 KRASP1-201ENST00000407852 552 ntBASIC24.61■■□□□ 1.53
SRGAP3O43295 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC24.61■■□□□ 1.53
SRGAP3O43295 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SRGAP3O43295 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
SRGAP3O43295 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
SRGAP3O43295 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SRGAP3O43295 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SRGAP3O43295 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SRGAP3O43295 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC24.61■■□□□ 1.53
SRGAP3O43295 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SRGAP3O43295 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SRGAP3O43295 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC24.61■■□□□ 1.53
SRGAP3O43295 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SRGAP3O43295 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SRGAP3O43295 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
SRGAP3O43295 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC24.6■■□□□ 1.53
SRGAP3O43295 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC24.6■■□□□ 1.53
SRGAP3O43295 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SRGAP3O43295 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
SRGAP3O43295 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC24.6■■□□□ 1.53
SRGAP3O43295 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SRGAP3O43295 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
SRGAP3O43295 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SRGAP3O43295 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
SRGAP3O43295 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC24.6■■□□□ 1.53
SRGAP3O43295 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC24.6■■□□□ 1.53
SRGAP3O43295 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC24.6■■□□□ 1.53
SRGAP3O43295 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
SRGAP3O43295 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC24.6■■□□□ 1.53
SRGAP3O43295 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SRGAP3O43295 AC073130.3-201ENST00000624389 2278 ntBASIC24.6■■□□□ 1.53
SRGAP3O43295 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SRGAP3O43295 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SRGAP3O43295 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC24.6■■□□□ 1.53
SRGAP3O43295 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SRGAP3O43295 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC24.6■■□□□ 1.53
SRGAP3O43295 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC24.59■■□□□ 1.53
SRGAP3O43295 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SRGAP3O43295 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SRGAP3O43295 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SRGAP3O43295 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SRGAP3O43295 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SRGAP3O43295 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.59■■□□□ 1.53
SRGAP3O43295 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
SRGAP3O43295 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SRGAP3O43295 AC133681.1-201ENST00000465482 601 ntBASIC24.59■■□□□ 1.53
SRGAP3O43295 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC24.59■■□□□ 1.53
SRGAP3O43295 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SRGAP3O43295 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SRGAP3O43295 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SRGAP3O43295 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SRGAP3O43295 AP001271.2-201ENST00000624018 1556 ntBASIC24.59■■□□□ 1.53
SRGAP3O43295 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
SRGAP3O43295 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
SRGAP3O43295 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
SRGAP3O43295 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SRGAP3O43295 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC24.58■■□□□ 1.53
SRGAP3O43295 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SRGAP3O43295 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC24.58■■□□□ 1.53
SRGAP3O43295 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SRGAP3O43295 PEX7-202ENST00000367756 680 ntTSL 3 BASIC24.58■■□□□ 1.53
SRGAP3O43295 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC24.58■■□□□ 1.53
SRGAP3O43295 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC24.58■■□□□ 1.53
SRGAP3O43295 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC24.58■■□□□ 1.53
SRGAP3O43295 F2R-202ENST00000505600 442 ntTSL 2 BASIC24.58■■□□□ 1.53
SRGAP3O43295 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC24.58■■□□□ 1.53
SRGAP3O43295 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SRGAP3O43295 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC24.58■■□□□ 1.53
SRGAP3O43295 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC24.58■■□□□ 1.53
SRGAP3O43295 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms