Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.65■■□□□ 1.86
MSH5O43196 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
MSH5O43196 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
MSH5O43196 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
MSH5O43196 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
MSH5O43196 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
MSH5O43196 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
MSH5O43196 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
MSH5O43196 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC26.65■■□□□ 1.86
MSH5O43196 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
MSH5O43196 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
MSH5O43196 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
MSH5O43196 AC096631.1-202ENST00000440162 917 ntTSL 2 BASIC26.64■■□□□ 1.86
MSH5O43196 CBX3P7-201ENST00000532876 502 ntBASIC26.64■■□□□ 1.86
MSH5O43196 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC26.64■■□□□ 1.86
MSH5O43196 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
MSH5O43196 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC26.64■■□□□ 1.86
MSH5O43196 AL022328.3-201ENST00000607943 679 ntBASIC26.64■■□□□ 1.86
MSH5O43196 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC26.64■■□□□ 1.86
MSH5O43196 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
MSH5O43196 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC26.64■■□□□ 1.86
MSH5O43196 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
MSH5O43196 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
MSH5O43196 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC26.64■■□□□ 1.85
MSH5O43196 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
MSH5O43196 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC26.64■■□□□ 1.85
MSH5O43196 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
MSH5O43196 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC26.63■■□□□ 1.85
MSH5O43196 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC26.63■■□□□ 1.85
MSH5O43196 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
MSH5O43196 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
MSH5O43196 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
MSH5O43196 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
MSH5O43196 ISG20-202ENST00000379224 540 ntTSL 3 BASIC26.63■■□□□ 1.85
MSH5O43196 AC012618.2-201ENST00000428058 849 ntBASIC26.63■■□□□ 1.85
MSH5O43196 MTATP6P17-201ENST00000431030 672 ntBASIC26.63■■□□□ 1.85
MSH5O43196 SLC29A4P2-201ENST00000504749 1089 ntBASIC26.63■■□□□ 1.85
MSH5O43196 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC26.63■■□□□ 1.85
MSH5O43196 AC233702.5-201ENST00000584107 538 ntBASIC26.63■■□□□ 1.85
MSH5O43196 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC26.63■■□□□ 1.85
MSH5O43196 RPAP2P1-201ENST00000603626 1168 ntBASIC26.63■■□□□ 1.85
MSH5O43196 AC100791.3-201ENST00000617619 330 ntBASIC26.63■■□□□ 1.85
MSH5O43196 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC26.63■■□□□ 1.85
MSH5O43196 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
MSH5O43196 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
MSH5O43196 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
MSH5O43196 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
MSH5O43196 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
MSH5O43196 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
MSH5O43196 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
MSH5O43196 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
MSH5O43196 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
MSH5O43196 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
MSH5O43196 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
MSH5O43196 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
MSH5O43196 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
MSH5O43196 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC26.62■■□□□ 1.85
MSH5O43196 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC26.62■■□□□ 1.85
MSH5O43196 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC26.62■■□□□ 1.85
MSH5O43196 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
MSH5O43196 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
MSH5O43196 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
MSH5O43196 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
MSH5O43196 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
MSH5O43196 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
MSH5O43196 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
MSH5O43196 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
MSH5O43196 AL445523.1-201ENST00000451184 1362 ntBASIC26.61■■□□□ 1.85
MSH5O43196 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
MSH5O43196 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
MSH5O43196 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
MSH5O43196 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC26.61■■□□□ 1.85
MSH5O43196 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
MSH5O43196 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
MSH5O43196 MCRIP2P1-201ENST00000394346 511 ntBASIC26.61■■□□□ 1.85
MSH5O43196 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC26.61■■□□□ 1.85
MSH5O43196 AC091799.1-201ENST00000422823 811 ntBASIC26.61■■□□□ 1.85
MSH5O43196 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC26.61■■□□□ 1.85
MSH5O43196 MTCO2P3-201ENST00000442543 421 ntBASIC26.61■■□□□ 1.85
MSH5O43196 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC26.61■■□□□ 1.85
MSH5O43196 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC26.61■■□□□ 1.85
MSH5O43196 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC26.61■■□□□ 1.85
MSH5O43196 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC26.61■■□□□ 1.85
MSH5O43196 TK2-213ENST00000563369 882 ntTSL 5 BASIC26.61■■□□□ 1.85
MSH5O43196 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
MSH5O43196 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC26.61■■□□□ 1.85
MSH5O43196 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC26.61■■□□□ 1.85
MSH5O43196 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
MSH5O43196 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
MSH5O43196 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
MSH5O43196 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
MSH5O43196 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC26.6■■□□□ 1.85
MSH5O43196 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
MSH5O43196 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.6■■□□□ 1.85
MSH5O43196 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
MSH5O43196 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
MSH5O43196 AC087499.1-201ENST00000418141 1075 ntBASIC26.6■■□□□ 1.85
MSH5O43196 POM121L13P-201ENST00000422362 380 ntBASIC26.6■■□□□ 1.85
MSH5O43196 TSPY15P-201ENST00000457163 923 ntBASIC26.6■■□□□ 1.85
MSH5O43196 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms