Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RRP8O43159 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RRP8O43159 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RRP8O43159 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RRP8O43159 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.65■□□□□ 0.58
RRP8O43159 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RRP8O43159 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RRP8O43159 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RRP8O43159 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RRP8O43159 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.65■□□□□ 0.58
RRP8O43159 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.65■□□□□ 0.58
RRP8O43159 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.65■□□□□ 0.58
RRP8O43159 AC080038.3-201ENST00000623346 1952 ntBASIC18.65■□□□□ 0.58
RRP8O43159 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
RRP8O43159 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RRP8O43159 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RRP8O43159 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RRP8O43159 TSPY5P-201ENST00000426936 936 ntBASIC18.65■□□□□ 0.58
RRP8O43159 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.65■□□□□ 0.58
RRP8O43159 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RRP8O43159 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.65■□□□□ 0.58
RRP8O43159 AL445675.2-201ENST00000620291 557 ntBASIC18.65■□□□□ 0.58
RRP8O43159 AL691432.3-201ENST00000621860 400 ntBASIC18.65■□□□□ 0.58
RRP8O43159 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RRP8O43159 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RRP8O43159 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.65■□□□□ 0.58
RRP8O43159 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RRP8O43159 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RRP8O43159 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RRP8O43159 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RRP8O43159 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.65■□□□□ 0.58
RRP8O43159 AIRN-201ENST00000601203 4374 ntBASIC18.65■□□□□ 0.58
RRP8O43159 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RRP8O43159 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RRP8O43159 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
RRP8O43159 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RRP8O43159 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RRP8O43159 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RRP8O43159 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RRP8O43159 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.64■□□□□ 0.57
RRP8O43159 PCED1CP-201ENST00000419887 785 ntBASIC18.64■□□□□ 0.57
RRP8O43159 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
RRP8O43159 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.64■□□□□ 0.57
RRP8O43159 B3GAT3P1-201ENST00000471720 806 ntBASIC18.64■□□□□ 0.57
RRP8O43159 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
RRP8O43159 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.64■□□□□ 0.57
RRP8O43159 AC093458.2-201ENST00000623150 629 ntBASIC18.64■□□□□ 0.57
RRP8O43159 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.64■□□□□ 0.57
RRP8O43159 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.64■□□□□ 0.57
RRP8O43159 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RRP8O43159 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.64■□□□□ 0.57
RRP8O43159 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RRP8O43159 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RRP8O43159 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RRP8O43159 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
RRP8O43159 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RRP8O43159 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RRP8O43159 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RRP8O43159 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RRP8O43159 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RRP8O43159 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.63■□□□□ 0.57
RRP8O43159 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.63■□□□□ 0.57
RRP8O43159 AL121956.5-201ENST00000625261 221 ntBASIC18.63■□□□□ 0.57
RRP8O43159 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RRP8O43159 AC116562.4-202ENST00000641738 218 ntBASIC18.63■□□□□ 0.57
RRP8O43159 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RRP8O43159 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RRP8O43159 IER3-202ENST00000376377 1350 ntBASIC18.63■□□□□ 0.57
RRP8O43159 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RRP8O43159 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.63■□□□□ 0.57
RRP8O43159 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RRP8O43159 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.63■□□□□ 0.57
RRP8O43159 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RRP8O43159 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RRP8O43159 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RRP8O43159 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.63■□□□□ 0.57
RRP8O43159 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.62■□□□□ 0.57
RRP8O43159 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RRP8O43159 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.62■□□□□ 0.57
RRP8O43159 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RRP8O43159 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RRP8O43159 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
RRP8O43159 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RRP8O43159 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RRP8O43159 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.62■□□□□ 0.57
RRP8O43159 MESTP1-201ENST00000404287 994 ntBASIC18.62■□□□□ 0.57
RRP8O43159 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RRP8O43159 CCR12P-201ENST00000446203 998 ntBASIC18.62■□□□□ 0.57
RRP8O43159 COX11P1-201ENST00000489116 835 ntBASIC18.62■□□□□ 0.57
RRP8O43159 YBX1P2-201ENST00000489612 999 ntBASIC18.62■□□□□ 0.57
RRP8O43159 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.62■□□□□ 0.57
RRP8O43159 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.62■□□□□ 0.57
RRP8O43159 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.62■□□□□ 0.57
RRP8O43159 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.62■□□□□ 0.57
RRP8O43159 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.62■□□□□ 0.57
RRP8O43159 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.62■□□□□ 0.57
RRP8O43159 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.62■□□□□ 0.57
RRP8O43159 AC131212.4-201ENST00000623606 975 ntBASIC18.62■□□□□ 0.57
RRP8O43159 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RRP8O43159 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms