Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM1O00151 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM1O00151 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM1O00151 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM1O00151 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
PDLIM1O00151 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM1O00151 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM1O00151 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDLIM1O00151 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM1O00151 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM1O00151 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM1O00151 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM1O00151 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM1O00151 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.8■□□□□ 0.6
PDLIM1O00151 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM1O00151 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.8■□□□□ 0.6
PDLIM1O00151 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM1O00151 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PDLIM1O00151 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM1O00151 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.8■□□□□ 0.6
PDLIM1O00151 AC079140.4-201ENST00000507448 529 ntBASIC18.8■□□□□ 0.6
PDLIM1O00151 NTF6G-201ENST00000591094 616 ntBASIC18.8■□□□□ 0.6
PDLIM1O00151 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.8■□□□□ 0.6
PDLIM1O00151 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.8■□□□□ 0.6
PDLIM1O00151 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PDLIM1O00151 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM1O00151 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM1O00151 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
PDLIM1O00151 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.8■□□□□ 0.6
PDLIM1O00151 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM1O00151 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM1O00151 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM1O00151 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM1O00151 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
PDLIM1O00151 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM1O00151 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PDLIM1O00151 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM1O00151 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM1O00151 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM1O00151 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM1O00151 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM1O00151 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
PDLIM1O00151 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.79■□□□□ 0.6
PDLIM1O00151 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.79■□□□□ 0.6
PDLIM1O00151 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
PDLIM1O00151 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM1O00151 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM1O00151 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM1O00151 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.79■□□□□ 0.6
PDLIM1O00151 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PDLIM1O00151 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PDLIM1O00151 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM1O00151 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PDLIM1O00151 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.78■□□□□ 0.6
PDLIM1O00151 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM1O00151 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM1O00151 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM1O00151 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM1O00151 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PDLIM1O00151 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
PDLIM1O00151 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM1O00151 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.78■□□□□ 0.6
PDLIM1O00151 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.78■□□□□ 0.6
PDLIM1O00151 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.78■□□□□ 0.6
PDLIM1O00151 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.78■□□□□ 0.6
PDLIM1O00151 MIR2861-201ENST00000636310 90 ntBASIC18.78■□□□□ 0.6
PDLIM1O00151 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PDLIM1O00151 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM1O00151 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM1O00151 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PDLIM1O00151 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM1O00151 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM1O00151 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.77■□□□□ 0.6
PDLIM1O00151 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM1O00151 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM1O00151 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.77■□□□□ 0.6
PDLIM1O00151 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.77■□□□□ 0.6
PDLIM1O00151 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM1O00151 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM1O00151 AC004854.2-201ENST00000608450 1441 ntBASIC18.77■□□□□ 0.6
PDLIM1O00151 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM1O00151 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM1O00151 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
PDLIM1O00151 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM1O00151 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM1O00151 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.77■□□□□ 0.6
PDLIM1O00151 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM1O00151 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM1O00151 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PDLIM1O00151 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.77■□□□□ 0.6
PDLIM1O00151 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM1O00151 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM1O00151 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM1O00151 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PDLIM1O00151 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PDLIM1O00151 Z82202.1-201ENST00000623446 1880 ntBASIC18.77■□□□□ 0.6
PDLIM1O00151 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.77■□□□□ 0.59
PDLIM1O00151 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
PDLIM1O00151 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDLIM1O00151 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms