Protein–RNA interactions for Protein: C9JBD0

KRBOX1, KRAB domain-containing protein 1, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRBOX1C9JBD0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 MIR4508-201ENST00000584178 70 ntBASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 AL356309.3-201ENST00000624132 1934 ntBASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRBOX1C9JBD0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 DUX4L4-201ENST00000566884 1269 ntBASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 AC005703.6-201ENST00000623265 1329 ntBASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 AC067852.2-201ENST00000590513 2313 ntBASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.12■□□□□ 0.17
KRBOX1C9JBD0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KRBOX1C9JBD0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRBOX1C9JBD0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.11■□□□□ 0.17
KRBOX1C9JBD0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRBOX1C9JBD0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRBOX1C9JBD0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRBOX1C9JBD0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRBOX1C9JBD0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRBOX1C9JBD0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRBOX1C9JBD0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
KRBOX1C9JBD0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRBOX1C9JBD0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.11■□□□□ 0.17
KRBOX1C9JBD0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.11■□□□□ 0.17
KRBOX1C9JBD0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
KRBOX1C9JBD0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRBOX1C9JBD0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRBOX1C9JBD0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRBOX1C9JBD0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRBOX1C9JBD0 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.1■□□□□ 0.17
KRBOX1C9JBD0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.09■□□□□ 0.17
KRBOX1C9JBD0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRBOX1C9JBD0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.09■□□□□ 0.17
KRBOX1C9JBD0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.09■□□□□ 0.17
KRBOX1C9JBD0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRBOX1C9JBD0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms