Protein–RNA interactions for Protein: A6NNJ1

FAM90A9P, Putative protein FAM90A9P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A9PA6NNJ1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.2■□□□□ 0.18
FAM90A9PA6NNJ1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.2■□□□□ 0.18
FAM90A9PA6NNJ1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
FAM90A9PA6NNJ1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
FAM90A9PA6NNJ1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM90A9PA6NNJ1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.2■□□□□ 0.18
FAM90A9PA6NNJ1 AC116562.4-201ENST00000641316 2276 ntBASIC16.2■□□□□ 0.18
FAM90A9PA6NNJ1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
FAM90A9PA6NNJ1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM90A9PA6NNJ1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 HLA-B-256ENST00000639848 1089 ntBASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FAM90A9PA6NNJ1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A9PA6NNJ1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A9PA6NNJ1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A9PA6NNJ1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A9PA6NNJ1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A9PA6NNJ1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A9PA6NNJ1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A9PA6NNJ1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.17■□□□□ 0.18
FAM90A9PA6NNJ1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.17■□□□□ 0.18
FAM90A9PA6NNJ1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A9PA6NNJ1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A9PA6NNJ1 AL158211.5-201ENST00000623583 2518 ntBASIC16.17■□□□□ 0.18
FAM90A9PA6NNJ1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A9PA6NNJ1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A9PA6NNJ1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A9PA6NNJ1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
FAM90A9PA6NNJ1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A9PA6NNJ1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.17■□□□□ 0.18
FAM90A9PA6NNJ1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.17■□□□□ 0.18
FAM90A9PA6NNJ1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.17■□□□□ 0.18
FAM90A9PA6NNJ1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FAM90A9PA6NNJ1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
FAM90A9PA6NNJ1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM90A9PA6NNJ1 PTBP1P-201ENST00000554374 1601 ntBASIC16.16■□□□□ 0.18
FAM90A9PA6NNJ1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.16■□□□□ 0.18
FAM90A9PA6NNJ1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM90A9PA6NNJ1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
FAM90A9PA6NNJ1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.16■□□□□ 0.18
FAM90A9PA6NNJ1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.16■□□□□ 0.18
FAM90A9PA6NNJ1 AC023632.3-201ENST00000521633 145 ntBASIC16.16■□□□□ 0.18
FAM90A9PA6NNJ1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.16■□□□□ 0.18
FAM90A9PA6NNJ1 KRT18P6-201ENST00000555540 1265 ntBASIC16.16■□□□□ 0.18
FAM90A9PA6NNJ1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FAM90A9PA6NNJ1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.16■□□□□ 0.18
FAM90A9PA6NNJ1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FAM90A9PA6NNJ1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms