Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TRABD2BA6NFA1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TRABD2BA6NFA1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRABD2BA6NFA1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRABD2BA6NFA1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 RNF165-205ENST00000588679 2904 ntBASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 AK4P3-201ENST00000418260 669 ntBASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRABD2BA6NFA1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 AC027702.1-201ENST00000563810 1770 ntBASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 ECEL1P2-202ENST00000465689 757 ntBASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 KRT18P56-201ENST00000507275 550 ntBASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 KRT126P-201ENST00000549467 1181 ntBASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 C2orf69P3-201ENST00000565542 1120 ntBASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRABD2BA6NFA1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRABD2BA6NFA1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRABD2BA6NFA1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRABD2BA6NFA1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRABD2BA6NFA1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRABD2BA6NFA1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRABD2BA6NFA1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRABD2BA6NFA1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.03■□□□□ 0.64
TRABD2BA6NFA1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.03■□□□□ 0.64
TRABD2BA6NFA1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRABD2BA6NFA1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRABD2BA6NFA1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.03■□□□□ 0.64
TRABD2BA6NFA1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.03■□□□□ 0.64
TRABD2BA6NFA1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRABD2BA6NFA1 LINC01238-205ENST00000567549 1107 ntBASIC19.03■□□□□ 0.64
TRABD2BA6NFA1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TRABD2BA6NFA1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.02■□□□□ 0.64
TRABD2BA6NFA1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TRABD2BA6NFA1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRABD2BA6NFA1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRABD2BA6NFA1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRABD2BA6NFA1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRABD2BA6NFA1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRABD2BA6NFA1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRABD2BA6NFA1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.02■□□□□ 0.64
TRABD2BA6NFA1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.02■□□□□ 0.64
TRABD2BA6NFA1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRABD2BA6NFA1 BX664615.1-201ENST00000443558 458 ntBASIC19.02■□□□□ 0.64
TRABD2BA6NFA1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRABD2BA6NFA1 AC022616.7-201ENST00000525383 220 ntBASIC19.02■□□□□ 0.64
TRABD2BA6NFA1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRABD2BA6NFA1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.02■□□□□ 0.64
TRABD2BA6NFA1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.02■□□□□ 0.64
TRABD2BA6NFA1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TRABD2BA6NFA1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRABD2BA6NFA1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
TRABD2BA6NFA1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRABD2BA6NFA1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRABD2BA6NFA1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.02■□□□□ 0.63
TRABD2BA6NFA1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
TRABD2BA6NFA1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRABD2BA6NFA1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRABD2BA6NFA1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRABD2BA6NFA1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms