Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RCCD1A6NED2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RCCD1A6NED2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RCCD1A6NED2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RCCD1A6NED2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RCCD1A6NED2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
RCCD1A6NED2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.07■□□□□ 0.96
RCCD1A6NED2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.06■□□□□ 0.96
RCCD1A6NED2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RCCD1A6NED2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RCCD1A6NED2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RCCD1A6NED2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RCCD1A6NED2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RCCD1A6NED2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RCCD1A6NED2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.06■□□□□ 0.96
RCCD1A6NED2 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.06■□□□□ 0.96
RCCD1A6NED2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RCCD1A6NED2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.06■□□□□ 0.96
RCCD1A6NED2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.06■□□□□ 0.96
RCCD1A6NED2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.06■□□□□ 0.96
RCCD1A6NED2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RCCD1A6NED2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RCCD1A6NED2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RCCD1A6NED2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RCCD1A6NED2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RCCD1A6NED2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RCCD1A6NED2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
RCCD1A6NED2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RCCD1A6NED2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RCCD1A6NED2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RCCD1A6NED2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RCCD1A6NED2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.05■□□□□ 0.96
RCCD1A6NED2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RCCD1A6NED2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RCCD1A6NED2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RCCD1A6NED2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.05■□□□□ 0.96
RCCD1A6NED2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.05■□□□□ 0.96
RCCD1A6NED2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.05■□□□□ 0.96
RCCD1A6NED2 CNN2P6-201ENST00000439038 900 ntBASIC21.05■□□□□ 0.96
RCCD1A6NED2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RCCD1A6NED2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.05■□□□□ 0.96
RCCD1A6NED2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.05■□□□□ 0.96
RCCD1A6NED2 MFSD11-216ENST00000590393 1141 ntBASIC21.05■□□□□ 0.96
RCCD1A6NED2 AC105020.6-201ENST00000621523 1217 ntBASIC21.05■□□□□ 0.96
RCCD1A6NED2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RCCD1A6NED2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RCCD1A6NED2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RCCD1A6NED2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RCCD1A6NED2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RCCD1A6NED2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RCCD1A6NED2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RCCD1A6NED2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RCCD1A6NED2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.04■□□□□ 0.96
RCCD1A6NED2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RCCD1A6NED2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RCCD1A6NED2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RCCD1A6NED2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.04■□□□□ 0.96
RCCD1A6NED2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RCCD1A6NED2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.04■□□□□ 0.96
RCCD1A6NED2 AC100791.3-201ENST00000617619 330 ntBASIC21.04■□□□□ 0.96
RCCD1A6NED2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.04■□□□□ 0.96
RCCD1A6NED2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.04■□□□□ 0.96
RCCD1A6NED2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RCCD1A6NED2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RCCD1A6NED2 AC068338.2-201ENST00000563278 1430 ntBASIC21.04■□□□□ 0.96
RCCD1A6NED2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RCCD1A6NED2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.03■□□□□ 0.96
RCCD1A6NED2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
RCCD1A6NED2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RCCD1A6NED2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RCCD1A6NED2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RCCD1A6NED2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.03■□□□□ 0.96
RCCD1A6NED2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.03■□□□□ 0.96
RCCD1A6NED2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.03■□□□□ 0.96
RCCD1A6NED2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.03■□□□□ 0.96
RCCD1A6NED2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.03■□□□□ 0.96
RCCD1A6NED2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RCCD1A6NED2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RCCD1A6NED2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.03■□□□□ 0.96
RCCD1A6NED2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RCCD1A6NED2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RCCD1A6NED2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RCCD1A6NED2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RCCD1A6NED2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RCCD1A6NED2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RCCD1A6NED2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RCCD1A6NED2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RCCD1A6NED2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RCCD1A6NED2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RCCD1A6NED2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RCCD1A6NED2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RCCD1A6NED2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.02■□□□□ 0.96
RCCD1A6NED2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RCCD1A6NED2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RCCD1A6NED2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RCCD1A6NED2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RCCD1A6NED2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RCCD1A6NED2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RCCD1A6NED2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RCCD1A6NED2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms