Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC189A1A4V9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC189A1A4V9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC189A1A4V9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC189A1A4V9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC189A1A4V9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.76
CCDC189A1A4V9 MCRIP2P1-201ENST00000394346 511 ntBASIC19.77■□□□□ 0.76
CCDC189A1A4V9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC189A1A4V9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC189A1A4V9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC189A1A4V9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC189A1A4V9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC189A1A4V9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC189A1A4V9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.77■□□□□ 0.75
CCDC189A1A4V9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.77■□□□□ 0.75
CCDC189A1A4V9 AP000997.3-201ENST00000623333 2250 ntBASIC19.77■□□□□ 0.75
CCDC189A1A4V9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.77■□□□□ 0.75
CCDC189A1A4V9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CCDC189A1A4V9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC189A1A4V9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC189A1A4V9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC189A1A4V9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC189A1A4V9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC189A1A4V9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC189A1A4V9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC189A1A4V9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC189A1A4V9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CCDC189A1A4V9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC189A1A4V9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC189A1A4V9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC189A1A4V9 RARRES2P4-201ENST00000514074 484 ntBASIC19.76■□□□□ 0.75
CCDC189A1A4V9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC189A1A4V9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC189A1A4V9 AC137761.2-201ENST00000561729 223 ntBASIC19.76■□□□□ 0.75
CCDC189A1A4V9 AC145350.3-201ENST00000569033 163 ntBASIC19.76■□□□□ 0.75
CCDC189A1A4V9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC189A1A4V9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC189A1A4V9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC189A1A4V9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC189A1A4V9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC189A1A4V9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC189A1A4V9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 AC125437.2-201ENST00000625180 2167 ntBASIC19.75■□□□□ 0.75
CCDC189A1A4V9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC189A1A4V9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.74■□□□□ 0.75
CCDC189A1A4V9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 MFSD11-216ENST00000590393 1141 ntBASIC19.74■□□□□ 0.75
CCDC189A1A4V9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 AC087623.3-201ENST00000607047 1098 ntBASIC19.74■□□□□ 0.75
CCDC189A1A4V9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC189A1A4V9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC189A1A4V9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC189A1A4V9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCDC189A1A4V9 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC189A1A4V9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC189A1A4V9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms