Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 TERF1P5-201ENST00000477545 1207 ntBASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF103-CHMP3A0A140T963 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 DPP3P2-201ENST00000416030 1696 ntBASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RNF103-CHMP3A0A140T963 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF103-CHMP3A0A140T963 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF103-CHMP3A0A140T963 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF103-CHMP3A0A140T963 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF103-CHMP3A0A140T963 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF103-CHMP3A0A140T963 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF103-CHMP3A0A140T963 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF103-CHMP3A0A140T963 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF103-CHMP3A0A140T963 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF103-CHMP3A0A140T963 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.02■□□□□ 0.64
RNF103-CHMP3A0A140T963 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF103-CHMP3A0A140T963 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.02■□□□□ 0.64
RNF103-CHMP3A0A140T963 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
RNF103-CHMP3A0A140T963 AC137761.2-201ENST00000561729 223 ntBASIC19.02■□□□□ 0.64
RNF103-CHMP3A0A140T963 AC145350.3-201ENST00000569033 163 ntBASIC19.02■□□□□ 0.64
RNF103-CHMP3A0A140T963 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
RNF103-CHMP3A0A140T963 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RNF103-CHMP3A0A140T963 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF103-CHMP3A0A140T963 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF103-CHMP3A0A140T963 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF103-CHMP3A0A140T963 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF103-CHMP3A0A140T963 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF103-CHMP3A0A140T963 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF103-CHMP3A0A140T963 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.02■□□□□ 0.63
RNF103-CHMP3A0A140T963 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.02■□□□□ 0.63
RNF103-CHMP3A0A140T963 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.02■□□□□ 0.63
RNF103-CHMP3A0A140T963 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
RNF103-CHMP3A0A140T963 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF103-CHMP3A0A140T963 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RNF103-CHMP3A0A140T963 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 PGM5P4-201ENST00000421970 445 ntBASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 KRT18P11-201ENST00000435214 1283 ntBASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 AL591742.1-201ENST00000604433 565 ntBASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF103-CHMP3A0A140T963 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms