Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV27A0A0K0K1C4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 AC019069.1-201ENST00000610008 1333 ntBASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV27A0A0K0K1C4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRBV27A0A0K0K1C4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 AC008406.3-201ENST00000620001 1374 ntBASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 SUDS3P1-201ENST00000505831 966 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms