Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRAV8-1A0A0A6YYK1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRAV8-1A0A0A6YYK1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-1A0A0A6YYK1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.04■□□□□ -0
TRAV8-1A0A0A6YYK1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.04■□□□□ -0
TRAV8-1A0A0A6YYK1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.04■□□□□ -0
TRAV8-1A0A0A6YYK1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.04■□□□□ -0
TRAV8-1A0A0A6YYK1 AC243732.1-201ENST00000612648 864 ntBASIC15.04■□□□□ -0
TRAV8-1A0A0A6YYK1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRAV8-1A0A0A6YYK1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-1A0A0A6YYK1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-1A0A0A6YYK1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-1A0A0A6YYK1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-1A0A0A6YYK1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-1A0A0A6YYK1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-1A0A0A6YYK1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-1A0A0A6YYK1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRAV8-1A0A0A6YYK1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRAV8-1A0A0A6YYK1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-1A0A0A6YYK1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-1A0A0A6YYK1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.02■□□□□ -0
TRAV8-1A0A0A6YYK1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-1A0A0A6YYK1 AL032819.2-201ENST00000624543 2162 ntBASIC15.02■□□□□ -0
TRAV8-1A0A0A6YYK1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-1A0A0A6YYK1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-1A0A0A6YYK1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-1A0A0A6YYK1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-1A0A0A6YYK1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-1A0A0A6YYK1 LINC02228-203ENST00000641970 1355 ntBASIC15.02■□□□□ -0
TRAV8-1A0A0A6YYK1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.02■□□□□ -0
TRAV8-1A0A0A6YYK1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-1A0A0A6YYK1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-1A0A0A6YYK1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.02■□□□□ -0
TRAV8-1A0A0A6YYK1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.02■□□□□ -0
TRAV8-1A0A0A6YYK1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-1A0A0A6YYK1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.02■□□□□ -0
TRAV8-1A0A0A6YYK1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-1A0A0A6YYK1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.02■□□□□ -0
TRAV8-1A0A0A6YYK1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.02■□□□□ -0
TRAV8-1A0A0A6YYK1 KRT18P20-201ENST00000548986 1279 ntBASIC15.02■□□□□ -0
TRAV8-1A0A0A6YYK1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.02■□□□□ -0
TRAV8-1A0A0A6YYK1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-1A0A0A6YYK1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-1A0A0A6YYK1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-1A0A0A6YYK1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-1A0A0A6YYK1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.02□□□□□ -0.01
TRAV8-1A0A0A6YYK1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-1A0A0A6YYK1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
TRAV8-1A0A0A6YYK1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRAV8-1A0A0A6YYK1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV8-1A0A0A6YYK1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-1A0A0A6YYK1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-1A0A0A6YYK1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-1A0A0A6YYK1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRAV8-1A0A0A6YYK1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRAV8-1A0A0A6YYK1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-1A0A0A6YYK1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-1A0A0A6YYK1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV8-1A0A0A6YYK1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV8-1A0A0A6YYK1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
TRAV8-1A0A0A6YYK1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-1A0A0A6YYK1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
TRAV8-1A0A0A6YYK1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TRAV8-1A0A0A6YYK1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-1A0A0A6YYK1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-1A0A0A6YYK1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-1A0A0A6YYK1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-1A0A0A6YYK1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV8-1A0A0A6YYK1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms