Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-8A0A0A6YYG3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRBV6-8A0A0A6YYG3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRBV6-8A0A0A6YYG3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
TRBV6-8A0A0A6YYG3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 LSM12P1-201ENST00000411836 588 ntBASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 AC093787.1-201ENST00000450396 207 ntBASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 AC133552.2-202ENST00000575694 574 ntBASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 AC116562.4-201ENST00000641316 2276 ntBASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-8A0A0A6YYG3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 TREX1-205ENST00000625293 1783 ntBASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 KRT17P1-201ENST00000399211 1546 ntBASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 AC004911.1-201ENST00000416316 871 ntBASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 AC080038.1-201ENST00000611274 1154 ntBASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV6-8A0A0A6YYG3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV6-8A0A0A6YYG3 PHGDH-210ENST00000641115 1638 ntBASIC13.75□□□□□ -0.21
TRBV6-8A0A0A6YYG3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-8A0A0A6YYG3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.75□□□□□ -0.21
TRBV6-8A0A0A6YYG3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-8A0A0A6YYG3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-8A0A0A6YYG3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.75□□□□□ -0.21
TRBV6-8A0A0A6YYG3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV6-8A0A0A6YYG3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms