Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 AC005332.7-201ENST00000614046 2005 ntBASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV27A0A087WT01 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 HLA-G-202ENST00000376815 851 ntBASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 HLA-G-203ENST00000376818 1127 ntBASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 AC005181.1-201ENST00000604782 1256 ntBASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV27A0A087WT01 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 C2orf69P4-201ENST00000565394 541 ntBASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV27A0A087WT01 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 AP001271.2-201ENST00000624018 1556 ntBASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV27A0A087WT01 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms