Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 PCSK1-201ENST00000311106 5086 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 RNU1-134P-201ENST00000362935 165 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 FTLP8-201ENST00000446770 267 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 PTTG3P-201ENST00000521862 606 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AL121612.2-201ENST00000612261 482 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 AL035661.1-201ENST00000620459 1144 ntBASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ALMS1Q8TCU4 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AL049634.1-201ENST00000453770 1720 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 RAPGEF6-215ENST00000627212 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AC007485.2-201ENST00000623493 1667 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AC005839.1-201ENST00000624148 3213 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 RNA5SP507-201ENST00000363603 121 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 OR2W4P-201ENST00000406496 926 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 SDHDP6-201ENST00000414693 480 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AL157777.1-201ENST00000468100 304 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 ZNF473-202ENST00000391821 4715 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 RN7SKP23-201ENST00000625159 4301 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 BMS1P17-202ENST00000416720 316 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 PPIAP10-201ENST00000438675 458 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AL450996.1-201ENST00000445574 1202 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AC090958.1-201ENST00000511122 351 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AC027229.1-201ENST00000583887 253 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 ZNF626-203ENST00000601440 5963 ntTSL 4 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 RPL34P3-201ENST00000421454 338 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AC245452.2-201ENST00000435222 392 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 PSMD10P3-201ENST00000437000 448 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AC002486.2-201ENST00000447806 590 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 RPS29P22-201ENST00000472363 168 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 AC091078.2-201ENST00000557145 559 ntBASIC4.16□□□□□ -1.74
ALMS1Q8TCU4 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms