Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 AC010442.1-201ENST00000515583 816 ntBASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 OR4A13P-201ENST00000529316 942 ntBASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 AC124293.1-201ENST00000530034 493 ntBASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 OR5F2P-201ENST00000532761 941 ntBASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 CCNG2P1-201ENST00000549521 1000 ntBASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 AC008015.1-201ENST00000555505 465 ntBASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 AP005205.1-201ENST00000563503 508 ntBASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 AC007346.2-201ENST00000564816 892 ntBASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 AC138749.2-201ENST00000566048 167 ntBASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 RN7SL32P-201ENST00000580514 281 ntBASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 RPSAP66-201ENST00000592196 606 ntBASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 AC073648.5-201ENST00000603502 305 ntBASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 AL138693.1-201ENST00000622219 129 ntBASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 AC091965.5-201ENST00000624785 342 ntBASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 AC104964.2-201ENST00000562242 4641 ntBASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
SHKBP1Q8TBC3 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 SAMMSON-222ENST00000641901 2727 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 THAP12P3-201ENST00000456373 2266 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 RNU12-2P-201ENST00000364789 156 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 SLC9B1P4-201ENST00000421957 1288 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 AL365203.2-201ENST00000423444 196 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 ZBTB8OSP2-201ENST00000423890 504 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 AC079193.1-201ENST00000460497 588 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 TFP1-201ENST00000460564 572 ntTSL 4 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 RPSAP48-201ENST00000466509 889 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 RPS16P9-201ENST00000477220 427 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 MTAPP1-201ENST00000489154 819 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 TFP1-203ENST00000490470 561 ntTSL 4 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 RN7SL518P-201ENST00000491887 280 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 MRPS5P3-201ENST00000515577 166 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 RNU6-720P-201ENST00000516363 108 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 SCARNA18.2-201ENST00000516882 84 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 AC103833.1-201ENST00000517442 172 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 OR5G4P-201ENST00000525251 760 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 OR4A2P-201ENST00000527276 913 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 AC079064.1-201ENST00000528365 362 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 AC135628.1-201ENST00000568867 534 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 MIR4470-201ENST00000583453 72 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 EIF1P5-201ENST00000585002 234 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 AP001981.2-201ENST00000603241 418 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 QTRT1P1-201ENST00000604344 1078 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 MFSD8-218ENST00000641186 4448 ntBASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SHKBP1Q8TBC3 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SHKBP1Q8TBC3 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms