RNA–Protein interactions for RNA: ENST00000494900.1

LINC01997-201, Transcript of long intergenic non-protein coding RNA 1997, humanhuman

TSL 2 BASIC

Gene LINC01997, Length 429 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01997-201ENST00000494900 AEBP2Q6ZN18 517 aaPredicted RBP28.92■■■□□ 2.22
LINC01997-201ENST00000494900 CHIC1Q5VXU3 224 aa27.09■■□□□ 1.93
LINC01997-201ENST00000494900 SENP3Q9H4L4 574 aaPredicted RBP24.81■■□□□ 1.56
LINC01997-201ENST00000494900 PHF23Q9BUL5 403 aaPredicted RBP24.38■■□□□ 1.49
LINC01997-201ENST00000494900 FOXD1Q16676 465 aa23.15■■□□□ 1.3
LINC01997-201ENST00000494900 POTEDQ86YR6 584 aa22.24■■□□□ 1.15
LINC01997-201ENST00000494900 MSH5O43196 834 aa21.92■■□□□ 1.1
LINC01997-201ENST00000494900 PIAS4Q8N2W9 510 aaPredicted RBP21.51■■□□□ 1.03
LINC01997-201ENST00000494900 PLPPR3Q6T4P5 718 aa21.35■■□□□ 1.01
LINC01997-201ENST00000494900 PPP6R1Q9UPN7 881 aa21.21■□□□□ 0.99
LINC01997-201ENST00000494900 ADRA2BP18089 450 aa21.11■□□□□ 0.97
LINC01997-201ENST00000494900 DMRT2Q9Y5R5 561 aa19.59■□□□□ 0.73
LINC01997-201ENST00000494900 MAPK8IP2Q13387 824 aaPredicted RBP19.54■□□□□ 0.72
LINC01997-201ENST00000494900 SCAF1Q9H7N4 1312 aaKnown RBP19.4■□□□□ 0.7
LINC01997-201ENST00000494900 CACNB1Q02641 598 aaPredicted RBP19.08■□□□□ 0.64
LINC01997-201ENST00000494900 DCAF8L1A6NGE4 600 aa18.76■□□□□ 0.59
LINC01997-201ENST00000494900 HOXD11P31277 338 aaPredicted RBP18.67■□□□□ 0.58
LINC01997-201ENST00000494900 PPP4R3CPQ6ZMV5 832 aa18.62■□□□□ 0.57
LINC01997-201ENST00000494900 RNF39Q9H2S5 420 aa18.62■□□□□ 0.57
LINC01997-201ENST00000494900 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
LINC01997-201ENST00000494900 RNF216Q9NWF9 866 aaPredicted RBP18.39■□□□□ 0.53
LINC01997-201ENST00000494900 C1QBPQ07021 282 aaKnown RBP18.35■□□□□ 0.53
LINC01997-201ENST00000494900 DNAJC5BQ9UF47 199 aa18.19■□□□□ 0.5
LINC01997-201ENST00000494900 NCBP3Q53F19 620 aaKnown RBP17.79■□□□□ 0.44
LINC01997-201ENST00000494900 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.76■□□□□ 0.43
LINC01997-201ENST00000494900 NPM3O75607 178 aaKnown RBP17.49■□□□□ 0.39
LINC01997-201ENST00000494900 POTEHQ6S545 545 aa17.33■□□□□ 0.36
LINC01997-201ENST00000494900 U3KPZ7 1027 aaPredicted RBP17.33■□□□□ 0.36
LINC01997-201ENST00000494900 DSG3P32926 999 aa17.26■□□□□ 0.35
LINC01997-201ENST00000494900 CAPN15O75808 1086 aa17.22■□□□□ 0.35
LINC01997-201ENST00000494900 SPINK5Q9NQ38 1064 aaPredicted RBP17.21■□□□□ 0.35
LINC01997-201ENST00000494900 APLP2Q06481 763 aa16.87■□□□□ 0.29
LINC01997-201ENST00000494900 SLC4A2P04920 1241 aa16.83■□□□□ 0.28
LINC01997-201ENST00000494900 ZNF219Q9P2Y4 722 aaPredicted RBP16.82■□□□□ 0.28
LINC01997-201ENST00000494900 TRHP20396 242 aaPredicted RBP16.81■□□□□ 0.28
LINC01997-201ENST00000494900 ABCB7O75027 752 aa16.75■□□□□ 0.27
LINC01997-201ENST00000494900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.71■□□□□ 0.27
LINC01997-201ENST00000494900 HNRNPUL2Q1KMD3 747 aaKnown RBP16.71■□□□□ 0.27
LINC01997-201ENST00000494900 KCNA4P22459 653 aa16.66■□□□□ 0.26
LINC01997-201ENST00000494900 SAMD1Q6SPF0 538 aaPredicted RBP16.57■□□□□ 0.24
LINC01997-201ENST00000494900 RBM42Q9BTD8 480 aaKnown RBP16.53■□□□□ 0.24
LINC01997-201ENST00000494900 CHRDL2Q6WN34 429 aa16.33■□□□□ 0.2
LINC01997-201ENST00000494900 POLA2Q14181 598 aa16.24■□□□□ 0.19
LINC01997-201ENST00000494900 MYCNP04198 464 aaPredicted RBP16.22■□□□□ 0.19
LINC01997-201ENST00000494900 AKT1S1Q96B36 256 aa16.02■□□□□ 0.16
LINC01997-201ENST00000494900 SP7Q8TDD2 431 aaPredicted RBP16.01■□□□□ 0.15
LINC01997-201ENST00000494900 ZBTB12Q9Y330 459 aaPredicted RBP15.95■□□□□ 0.14
LINC01997-201ENST00000494900 REM2Q8IYK8 340 aaPredicted RBP15.84■□□□□ 0.13
LINC01997-201ENST00000494900 PIP4P2Q8N4L2 257 aa15.82■□□□□ 0.12
LINC01997-201ENST00000494900 ATF5Q9Y2D1 282 aaPredicted RBP15.82■□□□□ 0.12
LINC01997-201ENST00000494900 FOXD4L1Q9NU39 408 aa15.76■□□□□ 0.11
LINC01997-201ENST00000494900 OSCARQ8IYS5 282 aa15.74■□□□□ 0.11
LINC01997-201ENST00000494900 PITPNM1O00562 1244 aa15.68■□□□□ 0.1
LINC01997-201ENST00000494900 HAX1O00165 279 aa15.67■□□□□ 0.1
LINC01997-201ENST00000494900 FXR2P51116 673 aaKnown RBP eCLIP15.67■□□□□ 0.1
LINC01997-201ENST00000494900 SLC4A1APQ9BWU0 796 aaKnown RBP15.64■□□□□ 0.09
LINC01997-201ENST00000494900 EVX2Q03828 476 aa15.4■□□□□ 0.06
LINC01997-201ENST00000494900 SPDYE2BA6NHP3 402 aa15.39■□□□□ 0.05
LINC01997-201ENST00000494900 SPDYE6P0CI01 402 aa15.39■□□□□ 0.05
LINC01997-201ENST00000494900 SPDYE2Q495Y8 402 aa15.39■□□□□ 0.05
LINC01997-201ENST00000494900 ATXN8OSP0DMR3 200 aa15.36■□□□□ 0.05
LINC01997-201ENST00000494900 FBLN2P98095 1184 aa15.31■□□□□ 0.04
LINC01997-201ENST00000494900 ZBTB22O15209 634 aa15.29■□□□□ 0.04
LINC01997-201ENST00000494900 PRKAR2AP13861 404 aaKnown RBP15.27■□□□□ 0.04
LINC01997-201ENST00000494900 SPDYE1Q8NFV5 336 aaPredicted RBP15.25■□□□□ 0.03
LINC01997-201ENST00000494900 CLEC11AQ9Y240 323 aa15.2■□□□□ 0.02
LINC01997-201ENST00000494900 C19orf67A6NJJ6 358 aa15.19■□□□□ 0.02
LINC01997-201ENST00000494900 SSUH2Q9Y2M2 353 aa15.11■□□□□ 0.01
LINC01997-201ENST00000494900 ZNF692Q9BU19 519 aaPredicted RBP15.09■□□□□ 0.01
LINC01997-201ENST00000494900 MKRN4PQ13434 485 aaPredicted RBP15.08■□□□□ 0
LINC01997-201ENST00000494900 GABBR2O75899 941 aa15.07■□□□□ 0
LINC01997-201ENST00000494900 LHX8Q68G74 356 aa15□□□□□ -0.01
LINC01997-201ENST00000494900 CHADLQ6NUI6 762 aa14.95□□□□□ -0.02
LINC01997-201ENST00000494900 PRR29P0C7W0 189 aa14.9□□□□□ -0.02
LINC01997-201ENST00000494900 PABPN1Q86U42 306 aaKnown RBP eCLIP14.84□□□□□ -0.03
LINC01997-201ENST00000494900 CD44P16070 742 aaKnown RBP14.76□□□□□ -0.05
LINC01997-201ENST00000494900 CLCN6P51797 869 aa14.74□□□□□ -0.05
LINC01997-201ENST00000494900 POTEIP0CG38 1075 aa14.73□□□□□ -0.05
LINC01997-201ENST00000494900 FARP1Q9Y4F1 1045 aaPredicted RBP14.71□□□□□ -0.05
LINC01997-201ENST00000494900 DCBLD2Q96PD2 775 aa14.56□□□□□ -0.08
LINC01997-201ENST00000494900 ZNF579Q8NAF0 562 aaKnown RBP14.53□□□□□ -0.08
LINC01997-201ENST00000494900 ZRANB1Q9UGI0 708 aa14.46□□□□□ -0.09
LINC01997-201ENST00000494900 PLSCR2Q9NRY7 297 aa14.43□□□□□ -0.1
LINC01997-201ENST00000494900 CREBZFQ9NS37 354 aa14.4□□□□□ -0.1
LINC01997-201ENST00000494900 STAG3Q9UJ98 1225 aa14.38□□□□□ -0.11
LINC01997-201ENST00000494900 GALR2O43603 387 aaPredicted RBP14.35□□□□□ -0.11
LINC01997-201ENST00000494900 OTUD5Q96G74 571 aa14.29□□□□□ -0.12
LINC01997-201ENST00000494900 PAK3O75914 559 aaPredicted RBP14.27□□□□□ -0.13
LINC01997-201ENST00000494900 POTEB2H3BUK9 544 aa14.22□□□□□ -0.13
LINC01997-201ENST00000494900 PHF12Q96QT6 1004 aa14.19□□□□□ -0.14
LINC01997-201ENST00000494900 NPM1P06748 294 aaKnown RBP eCLIP14.15□□□□□ -0.14
LINC01997-201ENST00000494900 POTEMA6NI47 508 aa14.14□□□□□ -0.15
LINC01997-201ENST00000494900 CSRNP3Q8WYN3 585 aa14.14□□□□□ -0.15
LINC01997-201ENST00000494900 SPDYE4A6NLX3 237 aa14.13□□□□□ -0.15
LINC01997-201ENST00000494900 PELP1Q8IZL8 1130 aaKnown RBP14.1□□□□□ -0.15
LINC01997-201ENST00000494900 MNX1P50219 401 aaPredicted RBP14.09□□□□□ -0.15
LINC01997-201ENST00000494900 POTEGQ6S5H5 508 aa14.08□□□□□ -0.16
LINC01997-201ENST00000494900 ASTLQ6HA08 431 aaPredicted RBP14.05□□□□□ -0.16
LINC01997-201ENST00000494900 METRNQ9UJH8 293 aa14.03□□□□□ -0.16
LINC01997-201ENST00000494900 SLC39A7Q92504 469 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 268 ms