Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC3.68□□□□□ -1.82
HSPG2P98160 AC009704.2-201ENST00000618739 483 ntBASIC3.68□□□□□ -1.82
HSPG2P98160 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC3.68□□□□□ -1.82
HSPG2P98160 AFP-201ENST00000226359 1914 ntTSL 5 BASIC3.68□□□□□ -1.82
HSPG2P98160 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
HSPG2P98160 AC025809.2-201ENST00000625085 1802 ntBASIC3.68□□□□□ -1.82
HSPG2P98160 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC3.68□□□□□ -1.82
HSPG2P98160 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC3.68□□□□□ -1.82
HSPG2P98160 AC079753.1-201ENST00000623243 3868 ntBASIC3.68□□□□□ -1.82
HSPG2P98160 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HSPG2P98160 VCPIP1-201ENST00000310421 9942 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HSPG2P98160 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HSPG2P98160 LRRC7-201ENST00000035383 5000 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
HSPG2P98160 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HSPG2P98160 CCSER1-209ENST00000509176 5847 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HSPG2P98160 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC3.68□□□□□ -1.82
HSPG2P98160 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HSPG2P98160 FO393409.1-201ENST00000399325 1372 ntBASIC3.68□□□□□ -1.82
HSPG2P98160 RNU1-32P-201ENST00000363937 159 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 P2RY10P2-201ENST00000416730 913 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 PSMC1P2-201ENST00000423961 1204 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 AC073610.1-201ENST00000489971 396 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 ATP5J2P6-201ENST00000565203 266 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HSPG2P98160 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC3.67□□□□□ -1.82
HSPG2P98160 MIR4480-201ENST00000582492 71 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC3.67□□□□□ -1.82
HSPG2P98160 AC104687.2-201ENST00000604442 342 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 AC141002.1-201ENST00000607025 279 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 AL118522.2-201ENST00000616045 615 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 DCLK3-201ENST00000416516 5344 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HSPG2P98160 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 FN1-209ENST00000432072 7759 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
HSPG2P98160 XIST-206ENST00000434839 2865 ntTSL 5 BASIC3.67□□□□□ -1.82
HSPG2P98160 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC3.67□□□□□ -1.82
HSPG2P98160 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 SSX3-202ENST00000376893 800 ntTSL 2 BASIC3.67□□□□□ -1.82
HSPG2P98160 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HSPG2P98160 AL357752.1-201ENST00000412817 349 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 AL354868.1-201ENST00000417077 482 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 GTF2IP2-201ENST00000424290 697 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC3.67□□□□□ -1.82
HSPG2P98160 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC3.67□□□□□ -1.82
HSPG2P98160 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC3.67□□□□□ -1.82
HSPG2P98160 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC3.67□□□□□ -1.82
HSPG2P98160 AC011840.5-201ENST00000582125 771 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 EIF3FP1-201ENST00000613970 806 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 AC183089.2-201ENST00000637931 916 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 LINC01739-205ENST00000641890 573 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 TTLL7-201ENST00000260505 7976 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
HSPG2P98160 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 SAR1B-201ENST00000402673 6682 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 MEGF8-203ENST00000378073 11034 ntTSL 5 BASIC3.67□□□□□ -1.82
HSPG2P98160 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
HSPG2P98160 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 SIPA1L2-203ENST00000366630 6690 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HSPG2P98160 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC3.67□□□□□ -1.82
HSPG2P98160 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HSPG2P98160 RNA5SP30-201ENST00000365552 115 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.67□□□□□ -1.82
HSPG2P98160 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 HMGA1P8-201ENST00000414130 321 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.67□□□□□ -1.82
HSPG2P98160 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC3.67□□□□□ -1.82
HSPG2P98160 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC3.67□□□□□ -1.82
HSPG2P98160 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC3.67□□□□□ -1.82
HSPG2P98160 RN7SL57P-201ENST00000493687 290 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC3.67□□□□□ -1.82
HSPG2P98160 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC3.67□□□□□ -1.82
HSPG2P98160 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC3.67□□□□□ -1.82
HSPG2P98160 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC3.67□□□□□ -1.82
HSPG2P98160 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC3.67□□□□□ -1.82
HSPG2P98160 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC3.67□□□□□ -1.82
HSPG2P98160 AC068790.4-201ENST00000602474 263 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 MIR6758-201ENST00000620653 63 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC3.67□□□□□ -1.82
HSPG2P98160 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC3.67□□□□□ -1.82
HSPG2P98160 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HSPG2P98160 ZKSCAN1-205ENST00000535170 8758 ntTSL 2 BASIC3.67□□□□□ -1.82
HSPG2P98160 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC3.67□□□□□ -1.82
HSPG2P98160 PCAT14-202ENST00000627127 3935 ntBASIC3.67□□□□□ -1.82
HSPG2P98160 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC3.67□□□□□ -1.82
HSPG2P98160 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms