Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC103563.5-201ENST00000455643 364 ntBASIC6.57□□□□□ -1.36
CDH6P55285 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH6P55285 RN7SL221P-201ENST00000466190 281 ntBASIC6.57□□□□□ -1.36
CDH6P55285 MRPL57P6-201ENST00000506570 309 ntBASIC6.57□□□□□ -1.36
CDH6P55285 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.57□□□□□ -1.36
CDH6P55285 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.57□□□□□ -1.36
CDH6P55285 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH6P55285 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH6P55285 AC025283.1-201ENST00000572039 734 ntBASIC6.57□□□□□ -1.36
CDH6P55285 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.57□□□□□ -1.36
CDH6P55285 AC005332.4-201ENST00000592752 579 ntBASIC6.57□□□□□ -1.36
CDH6P55285 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.57□□□□□ -1.36
CDH6P55285 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDH6P55285 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.57□□□□□ -1.36
CDH6P55285 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDH6P55285 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDH6P55285 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.57□□□□□ -1.36
CDH6P55285 AC063952.1-203ENST00000634410 658 ntBASIC6.57□□□□□ -1.36
CDH6P55285 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH6P55285 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.57□□□□□ -1.36
CDH6P55285 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.57□□□□□ -1.36
CDH6P55285 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDH6P55285 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDH6P55285 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.57□□□□□ -1.36
CDH6P55285 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
CDH6P55285 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDH6P55285 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH6P55285 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CDH6P55285 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.56□□□□□ -1.36
CDH6P55285 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH6P55285 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CDH6P55285 AL136984.1-201ENST00000607611 1893 ntBASIC6.56□□□□□ -1.36
CDH6P55285 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
CDH6P55285 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH6P55285 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.56□□□□□ -1.36
CDH6P55285 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH6P55285 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH6P55285 TMA16P2-201ENST00000413187 601 ntBASIC6.56□□□□□ -1.36
CDH6P55285 RPS17P17-201ENST00000419392 409 ntBASIC6.56□□□□□ -1.36
CDH6P55285 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.56□□□□□ -1.36
CDH6P55285 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH6P55285 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.56□□□□□ -1.36
CDH6P55285 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH6P55285 AC064862.5-201ENST00000440618 334 ntBASIC6.56□□□□□ -1.36
CDH6P55285 COX4I1P2-201ENST00000447446 547 ntBASIC6.56□□□□□ -1.36
CDH6P55285 SNRPCP11-201ENST00000492453 205 ntBASIC6.56□□□□□ -1.36
CDH6P55285 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.56□□□□□ -1.36
CDH6P55285 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH6P55285 AC124891.1-201ENST00000536322 519 ntBASIC6.56□□□□□ -1.36
CDH6P55285 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH6P55285 OR4H6P-201ENST00000563771 921 ntBASIC6.56□□□□□ -1.36
CDH6P55285 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH6P55285 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH6P55285 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH6P55285 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH6P55285 GAPDHP41-201ENST00000613707 975 ntBASIC6.56□□□□□ -1.36
CDH6P55285 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.56□□□□□ -1.36
CDH6P55285 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.56□□□□□ -1.36
CDH6P55285 MIR7159-201ENST00000620587 66 ntBASIC6.56□□□□□ -1.36
CDH6P55285 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.56□□□□□ -1.36
CDH6P55285 AC099654.11-201ENST00000638857 294 ntBASIC6.56□□□□□ -1.36
CDH6P55285 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH6P55285 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CDH6P55285 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDH6P55285 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.56□□□□□ -1.36
CDH6P55285 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.56□□□□□ -1.36
CDH6P55285 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CDH6P55285 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.56□□□□□ -1.36
CDH6P55285 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
CDH6P55285 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH6P55285 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
CDH6P55285 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH6P55285 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDH6P55285 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH6P55285 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH6P55285 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDH6P55285 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CDH6P55285 MIR433-201ENST00000384837 93 ntBASIC6.55□□□□□ -1.36
CDH6P55285 RNU11-6P-201ENST00000391127 133 ntBASIC6.55□□□□□ -1.36
CDH6P55285 AC003045.1-201ENST00000398779 713 ntBASIC6.55□□□□□ -1.36
CDH6P55285 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CDH6P55285 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.55□□□□□ -1.36
CDH6P55285 RN7SKP129-201ENST00000410288 299 ntBASIC6.55□□□□□ -1.36
CDH6P55285 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH6P55285 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.55□□□□□ -1.36
CDH6P55285 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.55□□□□□ -1.36
CDH6P55285 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.55□□□□□ -1.36
CDH6P55285 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.55□□□□□ -1.36
CDH6P55285 AC010343.2-201ENST00000510162 224 ntBASIC6.55□□□□□ -1.36
CDH6P55285 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.55□□□□□ -1.36
CDH6P55285 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDH6P55285 MRPS5P3-201ENST00000515577 166 ntBASIC6.55□□□□□ -1.36
CDH6P55285 IGHV4-55-201ENST00000520889 368 ntBASIC6.55□□□□□ -1.36
CDH6P55285 TDGP1-201ENST00000543961 1229 ntBASIC6.55□□□□□ -1.36
CDH6P55285 MIR744-201ENST00000578242 98 ntBASIC6.55□□□□□ -1.36
CDH6P55285 MIR3189-201ENST00000578735 73 ntBASIC6.55□□□□□ -1.36
CDH6P55285 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.55□□□□□ -1.36
CDH6P55285 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.55□□□□□ -1.36
CDH6P55285 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.55□□□□□ -1.36
CDH6P55285 AC006924.1-201ENST00000610750 559 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms