Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RPL23AP28-201ENST00000448062 470 ntBASIC5.82□□□□□ -1.48
SOX2P48431 CLIC4P1-201ENST00000453177 535 ntBASIC5.82□□□□□ -1.48
SOX2P48431 AP002345.1-201ENST00000456493 928 ntBASIC5.82□□□□□ -1.48
SOX2P48431 AC126615.1-201ENST00000470084 630 ntBASIC5.82□□□□□ -1.48
SOX2P48431 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.82□□□□□ -1.48
SOX2P48431 AC093663.2-201ENST00000484625 313 ntBASIC5.82□□□□□ -1.48
SOX2P48431 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SOX2P48431 ANK3-213ENST00000486349 493 ntTSL 2 BASIC5.82□□□□□ -1.48
SOX2P48431 RN7SL314P-201ENST00000490735 292 ntBASIC5.82□□□□□ -1.48
SOX2P48431 RN7SL518P-201ENST00000491887 280 ntBASIC5.82□□□□□ -1.48
SOX2P48431 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX2P48431 GAPDHP38-201ENST00000503632 1002 ntBASIC5.82□□□□□ -1.48
SOX2P48431 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX2P48431 SNX18P23-201ENST00000510867 677 ntBASIC5.82□□□□□ -1.48
SOX2P48431 HMGB1P47-201ENST00000511281 589 ntBASIC5.82□□□□□ -1.48
SOX2P48431 AC112198.4-201ENST00000515450 351 ntBASIC5.82□□□□□ -1.48
SOX2P48431 RNU6-1102P-201ENST00000516149 96 ntBASIC5.82□□□□□ -1.48
SOX2P48431 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC5.82□□□□□ -1.48
SOX2P48431 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX2P48431 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.82□□□□□ -1.48
SOX2P48431 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC5.82□□□□□ -1.48
SOX2P48431 DPPA3P2-202ENST00000557188 1219 ntBASIC5.82□□□□□ -1.48
SOX2P48431 AC010547.7-201ENST00000570323 333 ntBASIC5.82□□□□□ -1.48
SOX2P48431 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.82□□□□□ -1.48
SOX2P48431 MIR5705-201ENST00000579870 89 ntBASIC5.82□□□□□ -1.48
SOX2P48431 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC5.82□□□□□ -1.48
SOX2P48431 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SOX2P48431 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.82□□□□□ -1.48
SOX2P48431 AC122710.3-201ENST00000606566 541 ntBASIC5.82□□□□□ -1.48
SOX2P48431 AC005828.7-201ENST00000607331 556 ntBASIC5.82□□□□□ -1.48
SOX2P48431 AC012640.3-201ENST00000607847 430 ntBASIC5.82□□□□□ -1.48
SOX2P48431 CR589904.2-201ENST00000612533 440 ntBASIC5.82□□□□□ -1.48
SOX2P48431 AC005156.1-201ENST00000613371 573 ntBASIC5.82□□□□□ -1.48
SOX2P48431 AL050303.3-201ENST00000613704 284 ntBASIC5.82□□□□□ -1.48
SOX2P48431 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC5.82□□□□□ -1.48
SOX2P48431 AC018926.1-201ENST00000616335 435 ntBASIC5.82□□□□□ -1.48
SOX2P48431 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SOX2P48431 AC005899.7-201ENST00000618199 588 ntBASIC5.82□□□□□ -1.48
SOX2P48431 KDM5DP1-201ENST00000622542 298 ntBASIC5.82□□□□□ -1.48
SOX2P48431 AC004836.1-201ENST00000623032 634 ntBASIC5.82□□□□□ -1.48
SOX2P48431 AC097460.3-201ENST00000623099 442 ntBASIC5.82□□□□□ -1.48
SOX2P48431 AC012254.5-201ENST00000623573 478 ntBASIC5.82□□□□□ -1.48
SOX2P48431 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX2P48431 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX2P48431 AL662795.2-201ENST00000624252 3706 ntBASIC5.82□□□□□ -1.48
SOX2P48431 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX2P48431 AC006511.3-201ENST00000624929 1783 ntBASIC5.82□□□□□ -1.48
SOX2P48431 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SOX2P48431 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX2P48431 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.82□□□□□ -1.48
SOX2P48431 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.81□□□□□ -1.48
SOX2P48431 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SOX2P48431 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.81□□□□□ -1.48
SOX2P48431 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SOX2P48431 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SOX2P48431 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SOX2P48431 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SOX2P48431 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SOX2P48431 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SOX2P48431 AL929601.4-201ENST00000613011 1341 ntBASIC5.81□□□□□ -1.48
SOX2P48431 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.81□□□□□ -1.48
SOX2P48431 AL138847.1-201ENST00000258651 546 ntBASIC5.81□□□□□ -1.48
SOX2P48431 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SOX2P48431 RNU6-1331P-201ENST00000363658 106 ntBASIC5.81□□□□□ -1.48
SOX2P48431 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SOX2P48431 RNA5SP280-201ENST00000411230 115 ntBASIC5.81□□□□□ -1.48
SOX2P48431 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC5.81□□□□□ -1.48
SOX2P48431 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.81□□□□□ -1.48
SOX2P48431 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC5.81□□□□□ -1.48
SOX2P48431 ANXA2P2-201ENST00000435128 1020 ntBASIC5.81□□□□□ -1.48
SOX2P48431 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.81□□□□□ -1.48
SOX2P48431 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.81□□□□□ -1.48
SOX2P48431 AL513321.1-201ENST00000441175 761 ntBASIC5.81□□□□□ -1.48
SOX2P48431 AL606517.1-201ENST00000446914 387 ntBASIC5.81□□□□□ -1.48
SOX2P48431 RPL31P20-201ENST00000449593 360 ntBASIC5.81□□□□□ -1.48
SOX2P48431 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.81□□□□□ -1.48
SOX2P48431 AC005517.1-201ENST00000452091 489 ntBASIC5.81□□□□□ -1.48
SOX2P48431 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC5.81□□□□□ -1.48
SOX2P48431 CABYRP1-201ENST00000465493 1045 ntBASIC5.81□□□□□ -1.48
SOX2P48431 AC083906.1-201ENST00000509298 406 ntBASIC5.81□□□□□ -1.48
SOX2P48431 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.81□□□□□ -1.48
SOX2P48431 RN7SKP11-201ENST00000517018 287 ntBASIC5.81□□□□□ -1.48
SOX2P48431 IGLC4-201ENST00000517690 248 ntBASIC5.81□□□□□ -1.48
SOX2P48431 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC5.81□□□□□ -1.48
SOX2P48431 AC140063.1-201ENST00000541343 259 ntBASIC5.81□□□□□ -1.48
SOX2P48431 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.81□□□□□ -1.48
SOX2P48431 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SOX2P48431 FRG2IP-201ENST00000563581 781 ntBASIC5.81□□□□□ -1.48
SOX2P48431 AP001496.3-201ENST00000580230 913 ntBASIC5.81□□□□□ -1.48
SOX2P48431 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.81□□□□□ -1.48
SOX2P48431 FRG2MP-201ENST00000613317 856 ntBASIC5.81□□□□□ -1.48
SOX2P48431 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.81□□□□□ -1.48
SOX2P48431 AC097520.1-201ENST00000624435 385 ntBASIC5.81□□□□□ -1.48
SOX2P48431 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SOX2P48431 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SOX2P48431 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SOX2P48431 MAPK10-357ENST00000641831 2858 ntBASIC5.81□□□□□ -1.48
SOX2P48431 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SOX2P48431 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SOX2P48431 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms