Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC8.66□□□□□ -1.02
SCUBE3Q8IX30 IPP-202ENST00000396478 3113 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
SCUBE3Q8IX30 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SCUBE3Q8IX30 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
SCUBE3Q8IX30 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
SCUBE3Q8IX30 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC8.66□□□□□ -1.02
SCUBE3Q8IX30 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 GLRA3-202ENST00000340217 3065 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 TRIM60P19-201ENST00000452879 1462 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AL121936.1-201ENST00000641660 2884 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AC127070.5-201ENST00000623177 2104 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 OR2T6-201ENST00000355728 927 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 MIR135B-201ENST00000362189 97 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 RNU6-1331P-201ENST00000363658 106 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 NPM1P46-201ENST00000399556 865 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 HMGB3P23-201ENST00000414981 585 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AC019181.1-201ENST00000417151 310 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 TIMM9P3-201ENST00000428659 274 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 RPL21P88-201ENST00000436649 436 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AL359711.1-201ENST00000441999 123 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 RPS4XP4-201ENST00000443195 763 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AL451081.2-201ENST00000448115 933 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AC100843.1-201ENST00000475372 550 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AC117392.1-201ENST00000487061 596 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 ACTR3BP4-201ENST00000503033 1244 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 OR4C9P-201ENST00000532368 925 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AP003119.1-201ENST00000533437 538 ntTSL 4 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 PDCL3P1-201ENST00000534575 734 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 GTF2IP22-201ENST00000554443 182 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AC009997.1-201ENST00000557862 129 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AC027808.2-203ENST00000558261 638 ntTSL 5 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AC093826.2-201ENST00000579042 108 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 MIR5010-201ENST00000582846 120 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 WDR45BP1-201ENST00000583470 1029 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 VDAC1P5-201ENST00000603132 844 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AC011373.1-201ENST00000607270 237 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 MIR6872-201ENST00000612981 62 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 MIR6726-201ENST00000613751 61 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 MESTIT1_2.1-201ENST00000616328 235 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 AC007792.1-201ENST00000623023 402 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 SAMMSON-227ENST00000642114 1199 ntBASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
SCUBE3Q8IX30 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
SCUBE3Q8IX30 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
SCUBE3Q8IX30 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
SCUBE3Q8IX30 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
SCUBE3Q8IX30 PABPC1P9-201ENST00000426076 1612 ntBASIC8.65□□□□□ -1.03
SCUBE3Q8IX30 ZC3H15-201ENST00000337859 2138 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SCUBE3Q8IX30 CDC25C-203ENST00000415130 1556 ntTSL 5 BASIC8.65□□□□□ -1.03
SCUBE3Q8IX30 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
SCUBE3Q8IX30 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.03
SCUBE3Q8IX30 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 TRIM51EP-201ENST00000524374 1516 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 STXBP5-AS1-209ENST00000606831 2025 ntTSL 5 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AP001527.1-201ENST00000566440 1957 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 AC093225.1-201ENST00000506867 1408 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 EEF1A1P11-201ENST00000415278 1389 ntBASIC8.64□□□□□ -1.03
SCUBE3Q8IX30 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms