Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 RN7SL741P-201ENST00000482473 289 ntBASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 AL035690.1-201ENST00000490892 383 ntBASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 SNRPCP11-201ENST00000492453 205 ntBASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 AC106800.3-201ENST00000511389 308 ntBASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 AC009729.1-201ENST00000548873 1133 ntBASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 AC089984.3-201ENST00000552838 363 ntBASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 HMGN1P26-201ENST00000558737 303 ntBASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 MIR6889-201ENST00000613185 59 ntBASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RSPO3Q9BXY4 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 AP004289.1-201ENST00000436307 2205 ntBASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 SNORD16-201ENST00000362803 99 ntBASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 AL157702.1-201ENST00000398764 426 ntBASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 RNA5SP155-201ENST00000411154 129 ntBASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 AC015977.1-201ENST00000418887 292 ntBASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 RPS17P17-201ENST00000419392 409 ntBASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 AL139184.1-202ENST00000422303 222 ntBASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 AC064862.5-201ENST00000440618 334 ntBASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 RPL7AP69-201ENST00000595306 806 ntBASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 AC027334.1-201ENST00000603257 310 ntBASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 AL033543.1-201ENST00000623440 13454 ntBASIC5.8□□□□□ -1.48
RSPO3Q9BXY4 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 AC079248.1-201ENST00000427568 1546 ntBASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 MIR433-201ENST00000384837 93 ntBASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 AC245036.1-201ENST00000391727 309 ntBASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 AC017035.1-201ENST00000411999 1115 ntBASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 HMGA1P8-201ENST00000414130 321 ntBASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 FAM183DP-201ENST00000421987 399 ntBASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.79□□□□□ -1.48
RSPO3Q9BXY4 PCNPP2-201ENST00000441651 455 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms