Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 PA2G4P6-201ENST00000438325 1197 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 AC091153.1-201ENST00000466297 402 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 AC092905.1-201ENST00000467527 949 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 RN7SL583P-201ENST00000475692 287 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 AC007686.1-201ENST00000488511 463 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 MIR4697-201ENST00000582977 78 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS13CQ709C8 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS13CQ709C8 AC105749.1-201ENST00000631338 2008 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 CLIP1-219ENST00000620786 5913 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 RBM20-201ENST00000369519 7233 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS13CQ709C8 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS13CQ709C8 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS13CQ709C8 NEK1-203ENST00000507142 5556 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS13CQ709C8 TMX3-201ENST00000299608 4927 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS13CQ709C8 SLC25A25-AS1-201ENST00000418747 6391 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS13CQ709C8 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS13CQ709C8 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 RNA5SP339-201ENST00000390987 122 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 PRELID1P2-201ENST00000407805 396 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 IGLV2-34-201ENST00000490007 283 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 HIGD1AP14-201ENST00000507617 282 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 CTDSPL2-201ENST00000260327 6828 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS13CQ709C8 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 AC074141.1-201ENST00000588129 2995 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 BIN2P1-201ENST00000504996 1530 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 MTHFD2P5-201ENST00000320415 844 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 U8.4-201ENST00000363626 134 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS13CQ709C8 OR5AZ1P-201ENST00000527448 943 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 MIR4436B2-201ENST00000581415 91 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 MIR4436B1-201ENST00000583272 91 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 AC087763.1-201ENST00000603391 286 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 MIR7159-201ENST00000620587 66 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS13CQ709C8 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 PRDM15-202ENST00000398548 6654 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS13CQ709C8 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS13CQ709C8 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS13CQ709C8 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS13CQ709C8 TMEM75-201ENST00000624314 2165 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS13CQ709C8 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS13CQ709C8 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS13CQ709C8 ARMC9-214ENST00000611582 5759 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 AC008115.3-201ENST00000614874 549 ntBASIC4.93□□□□□ -1.62
VPS13CQ709C8 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 LAMA3-203ENST00000399516 9834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 GNL2P1-201ENST00000451274 2190 ntBASIC4.93□□□□□ -1.62
VPS13CQ709C8 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 ZNF154-202ENST00000512439 5687 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 TCF20-201ENST00000335626 6237 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 MARK2P4-201ENST00000503381 2380 ntBASIC4.93□□□□□ -1.62
VPS13CQ709C8 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 NMT1-201ENST00000258960 4879 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 KIAA1644-201ENST00000381176 6751 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS13CQ709C8 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS13CQ709C8 NME1P1-201ENST00000420914 382 ntBASIC4.93□□□□□ -1.62
VPS13CQ709C8 EIF1P7-201ENST00000487533 337 ntBASIC4.93□□□□□ -1.62
VPS13CQ709C8 PGAM1P13-201ENST00000507497 754 ntBASIC4.93□□□□□ -1.62
VPS13CQ709C8 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms