Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 CCDC85C-203ENST00000554996 619 ntTSL 48.81□□□□□ -14e-7■□□□□ 9
PRPF8Q6P2Q9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.235e-7■□□□□ 9
PRPF8Q6P2Q9 KANSL1-225ENST00000639356 1717 ntTSL 513.33□□□□□ -0.284e-12■□□□□ 9
PRPF8Q6P2Q9 KANSL1-209ENST00000574655 1681 ntTSL 513.14□□□□□ -0.314e-12■□□□□ 9
PRPF8Q6P2Q9 VPS26A-207ENST00000490696 800 ntTSL 513.05□□□□□ -0.325e-7■□□□□ 9
PRPF8Q6P2Q9 KANSL1-222ENST00000639099 1724 ntTSL 512.78□□□□□ -0.364e-12■□□□□ 9
PRPF8Q6P2Q9 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.415e-7■□□□□ 9
PRPF8Q6P2Q9 VPS26A-205ENST00000489656 817 ntTSL 511.59□□□□□ -0.555e-7■□□□□ 9
PRPF8Q6P2Q9 VPS26A-209ENST00000497564 462 ntTSL 511.59□□□□□ -0.555e-7■□□□□ 9
PRPF8Q6P2Q9 VPS26A-204ENST00000467852 666 ntTSL 311.16□□□□□ -0.625e-7■□□□□ 9
PRPF8Q6P2Q9 KANSL1-221ENST00000638902 1971 ntTSL 210.82□□□□□ -0.684e-12■□□□□ 9
PRPF8Q6P2Q9 VPS26A-203ENST00000395098 2554 ntTSL 5 BASIC10.54□□□□□ -0.725e-7■□□□□ 9
PRPF8Q6P2Q9 KANSL1-217ENST00000638269 3365 ntTSL 57.68□□□□□ -1.184e-12■□□□□ 9
PRPF8Q6P2Q9 KANSL1-213ENST00000576248 452 ntTSL 33.37□□□□□ -1.874e-12■□□□□ 9
PRPF8Q6P2Q9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.96■□□□□ 0.147e-7■□□□□ 9
PRPF8Q6P2Q9 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.86□□□□□ -0.197e-7■□□□□ 9
PRPF8Q6P2Q9 FOXK2-211ENST00000575578 571 ntTSL 212.14□□□□□ -0.474e-14■□□□□ 9
PRPF8Q6P2Q9 LRCH4-203ENST00000470184 659 ntTSL 212.85□□□□□ -0.354e-9■□□□□ 9
PRPF8Q6P2Q9 VWDE-204ENST00000485526 573 ntTSL 20.09□□□□□ -2.395e-8■□□□□ 9
PRPF8Q6P2Q9 CHDH-203ENST00000481668 631 ntTSL 217.07■□□□□ 0.322e-8■□□□□ 9
PRPF8Q6P2Q9 CHDH-202ENST00000467802 565 ntTSL 216.35■□□□□ 0.212e-8■□□□□ 9
PRPF8Q6P2Q9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.516e-7■□□□□ 9
PRPF8Q6P2Q9 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.27■□□□□ 0.356e-7■□□□□ 9
PRPF8Q6P2Q9 SEPT9-222ENST00000589070 582 ntTSL 315.79■□□□□ 0.126e-7■□□□□ 9
PRPF8Q6P2Q9 CAP1-216ENST00000449311 681 ntTSL 514.76□□□□□ -0.056e-8■□□□□ 9
PRPF8Q6P2Q9 ATP6V0E2-205ENST00000464683 495 ntTSL 514.28□□□□□ -0.126e-7■□□□□ 9
PRPF8Q6P2Q9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.01□□□□□ -0.176e-7■□□□□ 9
PRPF8Q6P2Q9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.01□□□□□ -0.176e-7■□□□□ 9
PRPF8Q6P2Q9 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.186e-7■□□□□ 9
PRPF8Q6P2Q9 SRCIN1-212ENST00000613927 1150 ntTSL 313.53□□□□□ -0.246e-7■□□□□ 9
PRPF8Q6P2Q9 SRCIN1-218ENST00000622519 5204 ntTSL 213.31□□□□□ -0.286e-7■□□□□ 9
PRPF8Q6P2Q9 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.286e-7■□□□□ 9
PRPF8Q6P2Q9 SRCIN1-214ENST00000621275 453 ntTSL 313.24□□□□□ -0.296e-7■□□□□ 9
PRPF8Q6P2Q9 SRCIN1-217ENST00000622190 4635 ntTSL 212.95□□□□□ -0.346e-7■□□□□ 9
PRPF8Q6P2Q9 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.91□□□□□ -0.346e-7■□□□□ 9
PRPF8Q6P2Q9 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.356e-8■□□□□ 9
PRPF8Q6P2Q9 TANK-223ENST00000494976 636 ntTSL 312.45□□□□□ -0.426e-8■□□□□ 9
PRPF8Q6P2Q9 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.34□□□□□ -0.436e-7■□□□□ 9
PRPF8Q6P2Q9 SEPT9-240ENST00000591833 576 ntTSL 412.32□□□□□ -0.446e-7■□□□□ 9
PRPF8Q6P2Q9 CMIP-212ENST00000623842 2685 nt12.17□□□□□ -0.466e-8■□□□□ 9
PRPF8Q6P2Q9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC11.77□□□□□ -0.536e-7■□□□□ 9
PRPF8Q6P2Q9 ATP6V0E2-206ENST00000471877 1766 ntTSL 211.67□□□□□ -0.546e-7■□□□□ 9
PRPF8Q6P2Q9 TANK-215ENST00000457887 762 ntTSL 511.17□□□□□ -0.626e-8■□□□□ 9
PRPF8Q6P2Q9 ALAD-207ENST00000482001 562 ntTSL 410.56□□□□□ -0.726e-7■□□□□ 9
PRPF8Q6P2Q9 ATP6V0E2-208ENST00000483478 475 ntTSL 310.52□□□□□ -0.736e-7■□□□□ 9
PRPF8Q6P2Q9 GSE1-211ENST00000496345 563 ntTSL 210.48□□□□□ -0.737e-15■□□□□ 9
PRPF8Q6P2Q9 XPO6-222ENST00000573645 509 ntTSL 310.46□□□□□ -0.732e-9■□□□□ 9
PRPF8Q6P2Q9 SHKBP1-213ENST00000597325 366 ntTSL 510.41□□□□□ -0.746e-7■□□□□ 9
PRPF8Q6P2Q9 ACSF2-216ENST00000509806 706 ntTSL 310.05□□□□□ -0.86e-7■□□□□ 9
PRPF8Q6P2Q9 PFDN5-206ENST00000548984 541 ntTSL 28.74□□□□□ -1.016e-7■□□□□ 9
PRPF8Q6P2Q9 PFDN5-213ENST00000550964 596 ntTSL 28.51□□□□□ -1.056e-7■□□□□ 9
PRPF8Q6P2Q9 ATP6V0E2-210ENST00000495408 569 ntTSL 48.23□□□□□ -1.096e-7■□□□□ 9
PRPF8Q6P2Q9 ARHGAP35-203ENST00000596593 346 ntTSL 38.22□□□□□ -1.096e-7■□□□□ 9
PRPF8Q6P2Q9 CFLAR-221ENST00000470664 704 ntTSL 38.15□□□□□ -1.12e-9■□□□□ 9
PRPF8Q6P2Q9 SHKBP1-220ENST00000599716 572 ntTSL 27.88□□□□□ -1.156e-7■□□□□ 9
PRPF8Q6P2Q9 TANK-207ENST00000429217 762 ntTSL 57.69□□□□□ -1.186e-8■□□□□ 9
PRPF8Q6P2Q9 TANK-216ENST00000461338 674 ntTSL 37.69□□□□□ -1.186e-8■□□□□ 9
PRPF8Q6P2Q9 TANK-212ENST00000440506 550 ntTSL 36.23□□□□□ -1.416e-8■□□□□ 9
PRPF8Q6P2Q9 ATP6V0E2-209ENST00000490092 501 ntTSL 46.13□□□□□ -1.436e-7■□□□□ 9
PRPF8Q6P2Q9 TANK-221ENST00000483622 566 ntTSL 55.94□□□□□ -1.466e-8■□□□□ 9
PRPF8Q6P2Q9 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.9□□□□□ -1.466e-8■□□□□ 9
PRPF8Q6P2Q9 PFDN5-217ENST00000552548 497 ntTSL 25.68□□□□□ -1.56e-7■□□□□ 9
PRPF8Q6P2Q9 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.18□□□□□ -1.586e-8■□□□□ 9
PRPF8Q6P2Q9 PFDN5-219ENST00000553171 484 ntTSL 1 (best)4.27□□□□□ -1.736e-7■□□□□ 9
PRPF8Q6P2Q9 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.69□□□□□ -1.826e-8■□□□□ 9
PRPF8Q6P2Q9 TANK-217ENST00000463502 570 ntTSL 33.47□□□□□ -1.856e-8■□□□□ 9
PRPF8Q6P2Q9 TANK-220ENST00000477952 427 ntTSL 23.23□□□□□ -1.896e-8■□□□□ 9
PRPF8Q6P2Q9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.986e-8■□□□□ 9
PRPF8Q6P2Q9 TANK-209ENST00000432692 576 ntTSL 52.51□□□□□ -2.016e-8■□□□□ 9
PRPF8Q6P2Q9 TANK-213ENST00000441987 533 ntTSL 52.51□□□□□ -2.016e-8■□□□□ 9
PRPF8Q6P2Q9 TANK-208ENST00000432002 600 ntTSL 51.75□□□□□ -2.136e-8■□□□□ 9
PRPF8Q6P2Q9 ORAOV1-218ENST00000569105 696 ntTSL 211.2□□□□□ -0.622e-6■□□□□ 9
PRPF8Q6P2Q9 ORAOV1-217ENST00000544096 3776 ntTSL 29.65□□□□□ -0.862e-6■□□□□ 9
PRPF8Q6P2Q9 ORAOV1-216ENST00000543863 533 ntTSL 36.28□□□□□ -1.42e-6■□□□□ 9
PRPF8Q6P2Q9 MPHOSPH10-203ENST00000476969 472 ntTSL 25.31□□□□□ -1.562e-13■□□□□ 9
PRPF8Q6P2Q9 TMEM94-216ENST00000580918 769 ntTSL 310.75□□□□□ -0.695e-7■□□□□ 9
PRPF8Q6P2Q9 TMEM94-226ENST00000582843 570 ntTSL 48.38□□□□□ -1.075e-7■□□□□ 9
PRPF8Q6P2Q9 LSM14A-207ENST00000589878 559 ntTSL 416.28■□□□□ 0.21e-9■□□□□ 9
PRPF8Q6P2Q9 TALDO1-208ENST00000532685 568 ntTSL 215.38■□□□□ 0.052e-13■□□□□ 9
PRPF8Q6P2Q9 TALDO1-204ENST00000530119 1191 ntTSL 210.02□□□□□ -0.812e-13■□□□□ 9
PRPF8Q6P2Q9 SH2B1-214ENST00000569471 791 ntTSL 312.07□□□□□ -0.482e-6■□□□□ 9
PRPF8Q6P2Q9 HERC2P2-201ENST00000613386 5181 ntBASIC8.01□□□□□ -1.132e-10■□□□□ 9
PRPF8Q6P2Q9 HERC2P2-205ENST00000619021 5746 ntTSL 1 (best) BASIC7.96□□□□□ -1.142e-10■□□□□ 9
PRPF8Q6P2Q9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.78■□□□□ 0.284e-6■□□□□ 9
PRPF8Q6P2Q9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.244e-6■□□□□ 9
PRPF8Q6P2Q9 FGFRL1-204ENST00000507339 562 ntTSL 416.48■□□□□ 0.234e-6■□□□□ 9
PRPF8Q6P2Q9 NR2F2-203ENST00000421109 2214 ntTSL 1 (best) BASIC9.66□□□□□ -0.864e-6■□□□□ 9
PRPF8Q6P2Q9 NR2F2-202ENST00000394171 3501 ntTSL 2 BASIC7.4□□□□□ -1.234e-6■□□□□ 9
PRPF8Q6P2Q9 G3BP1-213ENST00000523519 535 ntTSL 413.02□□□□□ -0.328e-15■□□□□ 9
PRPF8Q6P2Q9 G3BP1-205ENST00000518726 869 ntTSL 1 (best)8.98□□□□□ -0.978e-15■□□□□ 9
PRPF8Q6P2Q9 HDLBP-229ENST00000460826 442 ntTSL 211.82□□□□□ -0.522e-11■□□□□ 9
PRPF8Q6P2Q9 HCN3-202ENST00000467204 957 ntTSL 59.83□□□□□ -0.842e-6■□□□□ 9
PRPF8Q6P2Q9 EPAS1-207ENST00000467888 665 ntTSL 516.4■□□□□ 0.226e-9■□□□□ 9
PRPF8Q6P2Q9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.88■□□□□ 0.132e-17■□□□□ 9
PRPF8Q6P2Q9 POR-224ENST00000496888 939 ntTSL 214.19□□□□□ -0.141e-6■□□□□ 9
PRPF8Q6P2Q9 POR-221ENST00000487247 853 ntTSL 212.69□□□□□ -0.381e-6■□□□□ 9
PRPF8Q6P2Q9 DHCR7-209ENST00000531364 507 ntTSL 419.1■□□□□ 0.654e-6■□□□□ 9
PRPF8Q6P2Q9 DHCR7-206ENST00000527316 1005 ntTSL 518.46■□□□□ 0.554e-6■□□□□ 9
PRPF8Q6P2Q9 DHCR7-208ENST00000529990 525 ntTSL 417.84■□□□□ 0.454e-6■□□□□ 9
PRPF8Q6P2Q9 DHCR7-205ENST00000526780 968 ntTSL 214.51□□□□□ -0.094e-6■□□□□ 9
Retrieved 100 of 73,762 protein–RNA pairs in 475.4 ms