Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.98□□□□□ -1.29
COL6A2P12110 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
COL6A2P12110 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL6A2P12110 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.98□□□□□ -1.29
COL6A2P12110 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL6A2P12110 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL6A2P12110 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL6A2P12110 AL138847.1-201ENST00000258651 546 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL6A2P12110 RNA5SP472-201ENST00000363868 119 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 RNU4-28P-201ENST00000364739 141 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 RNA5SP396-201ENST00000364834 120 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 ARMCX7P-201ENST00000372828 562 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.98□□□□□ -1.29
COL6A2P12110 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.98□□□□□ -1.29
COL6A2P12110 PCNAP3-201ENST00000397222 778 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 AC009237.9-201ENST00000414800 347 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC6.98□□□□□ -1.29
COL6A2P12110 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.98□□□□□ -1.29
COL6A2P12110 HBBP1-201ENST00000433329 439 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.98□□□□□ -1.29
COL6A2P12110 AC245517.2-201ENST00000442890 346 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.98□□□□□ -1.29
COL6A2P12110 AL358794.1-201ENST00000445689 381 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 OR51P1P-201ENST00000447547 942 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 RPL7P55-201ENST00000450522 746 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 RN7SL688P-201ENST00000471754 275 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 STRADBP1-201ENST00000478954 1281 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.98□□□□□ -1.29
COL6A2P12110 MTND6P8-201ENST00000503471 522 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.98□□□□□ -1.29
COL6A2P12110 MTCO3P28-201ENST00000513351 515 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC6.98□□□□□ -1.29
COL6A2P12110 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.98□□□□□ -1.29
COL6A2P12110 RNU6-276P-201ENST00000516114 96 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 AC091163.3-201ENST00000518269 1144 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC6.98□□□□□ -1.29
COL6A2P12110 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.98□□□□□ -1.29
COL6A2P12110 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
COL6A2P12110 AC068631.3-201ENST00000538831 225 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC6.98□□□□□ -1.29
COL6A2P12110 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC6.98□□□□□ -1.29
COL6A2P12110 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.98□□□□□ -1.29
COL6A2P12110 AL109741.3-201ENST00000561748 592 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC6.98□□□□□ -1.29
COL6A2P12110 AC093524.1-201ENST00000564266 1094 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC6.98□□□□□ -1.29
COL6A2P12110 AC006120.1-201ENST00000579375 546 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 AF186192.2-204ENST00000581667 524 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 AC015818.6-201ENST00000584274 634 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.98□□□□□ -1.29
COL6A2P12110 AC091057.2-201ENST00000602594 792 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 AC079880.2-201ENST00000603790 1213 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 AC139493.1-201ENST00000604368 397 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 AC063962.1-201ENST00000608199 521 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 AC078909.2-201ENST00000620584 398 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 AC131009.3-201ENST00000621809 287 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 AC090617.9-201ENST00000623751 147 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 AC211433.3-201ENST00000623770 375 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
COL6A2P12110 AL139254.2-202ENST00000641937 1156 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL6A2P12110 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL6A2P12110 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL6A2P12110 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL6A2P12110 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.98□□□□□ -1.29
COL6A2P12110 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.98□□□□□ -1.29
COL6A2P12110 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL6A2P12110 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
COL6A2P12110 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL6A2P12110 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.98□□□□□ -1.29
COL6A2P12110 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.98□□□□□ -1.29
COL6A2P12110 NEK2P2-201ENST00000438441 1338 ntBASIC6.98□□□□□ -1.29
COL6A2P12110 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL6A2P12110 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL6A2P12110 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL6A2P12110 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL6A2P12110 AC009135.2-201ENST00000624136 1768 ntBASIC6.97□□□□□ -1.29
COL6A2P12110 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.97□□□□□ -1.29
COL6A2P12110 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL6A2P12110 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.97□□□□□ -1.29
COL6A2P12110 AP003486.1-201ENST00000525716 3994 ntBASIC6.97□□□□□ -1.29
COL6A2P12110 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL6A2P12110 AC127070.3-201ENST00000503695 3263 ntBASIC6.97□□□□□ -1.29
COL6A2P12110 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
COL6A2P12110 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
COL6A2P12110 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
COL6A2P12110 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL6A2P12110 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL6A2P12110 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.97□□□□□ -1.29
COL6A2P12110 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC6.97□□□□□ -1.29
COL6A2P12110 AC119751.3-201ENST00000399720 670 ntBASIC6.97□□□□□ -1.29
COL6A2P12110 FTH1P26-201ENST00000406512 701 ntBASIC6.97□□□□□ -1.29
COL6A2P12110 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.97□□□□□ -1.29
COL6A2P12110 AL158827.1-201ENST00000416300 391 ntBASIC6.97□□□□□ -1.29
COL6A2P12110 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
COL6A2P12110 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.97□□□□□ -1.29
COL6A2P12110 PHB2P1-201ENST00000434943 890 ntBASIC6.97□□□□□ -1.29
COL6A2P12110 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
COL6A2P12110 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms