Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL163193.1-201ENST00000444895 788 ntBASIC7.44□□□□□ -1.22
COL4A5P29400 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.44□□□□□ -1.22
COL4A5P29400 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.44□□□□□ -1.22
COL4A5P29400 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.44□□□□□ -1.22
COL4A5P29400 IMMP1LP3-201ENST00000604197 224 ntBASIC7.44□□□□□ -1.22
COL4A5P29400 AL035661.1-201ENST00000620459 1144 ntBASIC7.44□□□□□ -1.22
COL4A5P29400 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL4A5P29400 RPS2P45-201ENST00000469997 2057 ntBASIC7.44□□□□□ -1.22
COL4A5P29400 AC027279.4-201ENST00000624371 2072 ntBASIC7.44□□□□□ -1.22
COL4A5P29400 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL4A5P29400 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC7.44□□□□□ -1.22
COL4A5P29400 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.44□□□□□ -1.22
COL4A5P29400 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.43□□□□□ -1.22
COL4A5P29400 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A5P29400 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.43□□□□□ -1.22
COL4A5P29400 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.43□□□□□ -1.22
COL4A5P29400 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.43□□□□□ -1.22
COL4A5P29400 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A5P29400 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A5P29400 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.43□□□□□ -1.22
COL4A5P29400 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A5P29400 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC7.43□□□□□ -1.22
COL4A5P29400 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.43□□□□□ -1.22
COL4A5P29400 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A5P29400 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
COL4A5P29400 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.43□□□□□ -1.22
COL4A5P29400 AC008753.1-201ENST00000423096 284 ntBASIC7.43□□□□□ -1.22
COL4A5P29400 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
COL4A5P29400 DUTP7-201ENST00000507982 486 ntBASIC7.43□□□□□ -1.22
COL4A5P29400 AC138866.2-201ENST00000508650 584 ntBASIC7.43□□□□□ -1.22
COL4A5P29400 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.43□□□□□ -1.22
COL4A5P29400 AC115837.1-201ENST00000517662 1001 ntBASIC7.43□□□□□ -1.22
COL4A5P29400 AC079395.2-201ENST00000610982 737 ntBASIC7.43□□□□□ -1.22
COL4A5P29400 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A5P29400 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A5P29400 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A5P29400 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.43□□□□□ -1.22
COL4A5P29400 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.43□□□□□ -1.22
COL4A5P29400 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A5P29400 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
COL4A5P29400 AL023806.3-201ENST00000638502 2704 ntBASIC7.43□□□□□ -1.22
COL4A5P29400 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A5P29400 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
COL4A5P29400 MARK2P4-201ENST00000503381 2380 ntBASIC7.43□□□□□ -1.22
COL4A5P29400 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A5P29400 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
COL4A5P29400 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
COL4A5P29400 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
COL4A5P29400 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
COL4A5P29400 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A5P29400 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.42□□□□□ -1.22
COL4A5P29400 AC110373.1-201ENST00000505994 3505 ntBASIC7.42□□□□□ -1.22
COL4A5P29400 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A5P29400 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A5P29400 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A5P29400 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
COL4A5P29400 AC110597.1-201ENST00000562669 3176 ntBASIC7.42□□□□□ -1.22
COL4A5P29400 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A5P29400 OR2M1P-201ENST00000318104 951 ntBASIC7.42□□□□□ -1.22
COL4A5P29400 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
COL4A5P29400 AL391422.1-201ENST00000402155 436 ntBASIC7.42□□□□□ -1.22
COL4A5P29400 NPM1P4-201ENST00000414095 812 ntBASIC7.42□□□□□ -1.22
COL4A5P29400 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.42□□□□□ -1.22
COL4A5P29400 NANOGP4-201ENST00000427230 913 ntBASIC7.42□□□□□ -1.22
COL4A5P29400 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
COL4A5P29400 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.42□□□□□ -1.22
COL4A5P29400 AL122020.1-201ENST00000472287 459 ntBASIC7.42□□□□□ -1.22
COL4A5P29400 AC092865.4-201ENST00000477936 615 ntBASIC7.42□□□□□ -1.22
COL4A5P29400 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.42□□□□□ -1.22
COL4A5P29400 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.42□□□□□ -1.22
COL4A5P29400 AP005639.1-201ENST00000526939 192 ntBASIC7.42□□□□□ -1.22
COL4A5P29400 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.42□□□□□ -1.22
COL4A5P29400 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A5P29400 AC006530.1-201ENST00000555980 571 ntBASIC7.42□□□□□ -1.22
COL4A5P29400 AL136131.3-201ENST00000607600 188 ntBASIC7.42□□□□□ -1.22
COL4A5P29400 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.42□□□□□ -1.22
COL4A5P29400 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A5P29400 AC105342.1-201ENST00000378334 6848 ntBASIC7.42□□□□□ -1.22
COL4A5P29400 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.42□□□□□ -1.22
COL4A5P29400 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A5P29400 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
COL4A5P29400 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A5P29400 MFSD8-217ENST00000641178 4374 ntBASIC7.42□□□□□ -1.22
COL4A5P29400 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.42□□□□□ -1.22
COL4A5P29400 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.42□□□□□ -1.22
COL4A5P29400 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A5P29400 CD46-209ENST00000367047 3089 ntTSL 5 BASIC7.42□□□□□ -1.22
COL4A5P29400 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A5P29400 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A5P29400 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A5P29400 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC7.42□□□□□ -1.22
COL4A5P29400 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.42□□□□□ -1.22
COL4A5P29400 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A5P29400 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
COL4A5P29400 GUCY1B2-204ENST00000531898 1979 ntBASIC7.42□□□□□ -1.22
COL4A5P29400 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
COL4A5P29400 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
COL4A5P29400 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
COL4A5P29400 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
COL4A5P29400 AC009120.2-204ENST00000621548 2032 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms