Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.91□□□□□ -1.46
SHC1P29353 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.91□□□□□ -1.46
SHC1P29353 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.91□□□□□ -1.46
SHC1P29353 AC128677.1-201ENST00000436016 442 ntBASIC5.91□□□□□ -1.46
SHC1P29353 AC064862.5-201ENST00000440618 334 ntBASIC5.91□□□□□ -1.46
SHC1P29353 AL355355.1-201ENST00000442900 793 ntBASIC5.91□□□□□ -1.46
SHC1P29353 UBE2V2P4-201ENST00000447495 259 ntBASIC5.91□□□□□ -1.46
SHC1P29353 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHC1P29353 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.91□□□□□ -1.46
SHC1P29353 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHC1P29353 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHC1P29353 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
SHC1P29353 USP9YP2-201ENST00000504503 1000 ntBASIC5.91□□□□□ -1.46
SHC1P29353 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHC1P29353 NACAP5-201ENST00000509863 636 ntBASIC5.91□□□□□ -1.46
SHC1P29353 USP9YP1-201ENST00000513521 1002 ntBASIC5.91□□□□□ -1.46
SHC1P29353 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.91□□□□□ -1.46
SHC1P29353 OR52K3P-201ENST00000531655 943 ntBASIC5.91□□□□□ -1.46
SHC1P29353 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.91□□□□□ -1.46
SHC1P29353 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.91□□□□□ -1.46
SHC1P29353 AC092718.4-201ENST00000566639 716 ntBASIC5.91□□□□□ -1.46
SHC1P29353 AL078623.1-201ENST00000602702 907 ntBASIC5.91□□□□□ -1.46
SHC1P29353 AC012175.1-201ENST00000603755 531 ntBASIC5.91□□□□□ -1.46
SHC1P29353 AL352984.2-201ENST00000611153 546 ntBASIC5.91□□□□□ -1.46
SHC1P29353 AC114546.4-201ENST00000624413 369 ntBASIC5.91□□□□□ -1.46
SHC1P29353 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.91□□□□□ -1.46
SHC1P29353 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHC1P29353 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHC1P29353 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.91□□□□□ -1.46
SHC1P29353 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHC1P29353 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.91□□□□□ -1.46
SHC1P29353 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.91□□□□□ -1.46
SHC1P29353 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHC1P29353 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHC1P29353 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.91□□□□□ -1.46
SHC1P29353 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHC1P29353 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.9□□□□□ -1.46
SHC1P29353 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SHC1P29353 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SHC1P29353 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.9□□□□□ -1.46
SHC1P29353 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.9□□□□□ -1.46
SHC1P29353 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
SHC1P29353 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHC1P29353 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SHC1P29353 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SHC1P29353 AP004289.1-201ENST00000436307 2205 ntBASIC5.9□□□□□ -1.46
SHC1P29353 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SHC1P29353 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
SHC1P29353 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHC1P29353 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.9□□□□□ -1.46
SHC1P29353 OR11H13P-201ENST00000359695 979 ntBASIC5.9□□□□□ -1.46
SHC1P29353 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SHC1P29353 RNU1-46P-201ENST00000384425 164 ntBASIC5.9□□□□□ -1.46
SHC1P29353 AL359092.1-201ENST00000417156 265 ntBASIC5.9□□□□□ -1.46
SHC1P29353 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHC1P29353 Z68868.1-201ENST00000429048 544 ntBASIC5.9□□□□□ -1.46
SHC1P29353 NPM1P23-201ENST00000440193 849 ntBASIC5.9□□□□□ -1.46
SHC1P29353 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.9□□□□□ -1.46
SHC1P29353 AL020997.1-201ENST00000446554 349 ntBASIC5.9□□□□□ -1.46
SHC1P29353 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.9□□□□□ -1.46
SHC1P29353 AC115223.1-201ENST00000466377 870 ntBASIC5.9□□□□□ -1.46
SHC1P29353 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHC1P29353 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
SHC1P29353 SNRPCP11-201ENST00000492453 205 ntBASIC5.9□□□□□ -1.46
SHC1P29353 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHC1P29353 RPL19P11-201ENST00000495944 589 ntBASIC5.9□□□□□ -1.46
SHC1P29353 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.9□□□□□ -1.46
SHC1P29353 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.9□□□□□ -1.46
SHC1P29353 AC083906.1-201ENST00000509298 406 ntBASIC5.9□□□□□ -1.46
SHC1P29353 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.9□□□□□ -1.46
SHC1P29353 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.9□□□□□ -1.46
SHC1P29353 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHC1P29353 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.9□□□□□ -1.46
SHC1P29353 AC133552.4-201ENST00000576103 676 ntBASIC5.9□□□□□ -1.46
SHC1P29353 MIR212-201ENST00000586026 110 ntBASIC5.9□□□□□ -1.46
SHC1P29353 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.9□□□□□ -1.46
SHC1P29353 AC114477.1-201ENST00000605097 605 ntBASIC5.9□□□□□ -1.46
SHC1P29353 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.9□□□□□ -1.46
SHC1P29353 GAPDHP41-201ENST00000613707 975 ntBASIC5.9□□□□□ -1.46
SHC1P29353 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.9□□□□□ -1.46
SHC1P29353 MRPL57P1-201ENST00000621486 265 ntBASIC5.9□□□□□ -1.46
SHC1P29353 AC068213.1-201ENST00000625124 226 ntBASIC5.9□□□□□ -1.46
SHC1P29353 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.9□□□□□ -1.46
SHC1P29353 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHC1P29353 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.9□□□□□ -1.47
SHC1P29353 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
SHC1P29353 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
SHC1P29353 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.9□□□□□ -1.47
SHC1P29353 AC005332.9-201ENST00000620266 2921 ntBASIC5.9□□□□□ -1.47
SHC1P29353 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.9□□□□□ -1.47
SHC1P29353 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SHC1P29353 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
SHC1P29353 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.9□□□□□ -1.47
SHC1P29353 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SHC1P29353 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHC1P29353 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.89□□□□□ -1.47
SHC1P29353 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHC1P29353 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.89□□□□□ -1.47
SHC1P29353 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHC1P29353 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms