Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AC100810.3-201ENST00000633189 2240 ntBASIC4.81□□□□□ -1.64
HLA-DQA1P01909 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AC074141.1-201ENST00000588129 2995 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 CCNT2P1-201ENST00000423082 1315 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 AC226101.1-201ENST00000401483 387 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 U3.43-201ENST00000410734 213 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 RPL12P10-201ENST00000413498 498 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 SMARCE1P1-201ENST00000417747 1186 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 CHCHD3P1-201ENST00000425516 676 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 BX119904.3-201ENST00000428194 957 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 BX276092.6-201ENST00000430476 250 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 VDAC2P3-201ENST00000430995 828 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 RPL21P33-201ENST00000444831 484 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 BX276092.8-201ENST00000455722 250 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 WBP1LP1-201ENST00000460451 896 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 RN7SL145P-201ENST00000469955 296 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 UBE2CP4-201ENST00000561405 535 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 EIF4A3P1-201ENST00000578499 647 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 AL022394.1-201ENST00000606979 292 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 MIR6726-201ENST00000613751 61 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 AC069542.2-201ENST00000624816 216 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 FKBP1AP4-201ENST00000631775 336 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 JAML-213ENST00000640745 951 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 MAPK10-350ENST00000641777 965 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 OR7E161P-202ENST00000641994 1033 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 AC137056.2-201ENST00000624055 1958 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 AC125238.2-201ENST00000430003 1440 ntBASIC4.8□□□□□ -1.64
HLA-DQA1P01909 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DQA1P01909 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 AC023886.2-201ENST00000321285 411 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 RN7SKP1-201ENST00000365525 307 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 RPSAP44-201ENST00000406712 884 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 TYMSP1-201ENST00000407851 869 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 VDAC1P10-201ENST00000416715 891 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 SPATA20P1-201ENST00000423089 438 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 GAPDHP57-201ENST00000424400 585 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 MTND1P10-201ENST00000426108 832 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 AC092106.2-201ENST00000436597 487 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 MYL6P3-201ENST00000436904 432 ntBASIC4.79□□□□□ -1.64
HLA-DQA1P01909 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
HLA-DQA1P01909 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms